Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 AC026471.6-201ENST00000622954 1905 ntBASIC17.34■□□□□ 0.37
RITA1Q96K30 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.33■□□□□ 0.37
RITA1Q96K30 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RITA1Q96K30 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RITA1Q96K30 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
RITA1Q96K30 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.33■□□□□ 0.36
RITA1Q96K30 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.33■□□□□ 0.36
RITA1Q96K30 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.33■□□□□ 0.36
RITA1Q96K30 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RITA1Q96K30 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 FAM99A-202ENST00000538190 1989 ntBASIC17.33■□□□□ 0.36
RITA1Q96K30 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RITA1Q96K30 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.32■□□□□ 0.36
RITA1Q96K30 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
RITA1Q96K30 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RITA1Q96K30 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RITA1Q96K30 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RITA1Q96K30 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.32■□□□□ 0.36
RITA1Q96K30 AC027682.1-201ENST00000562846 899 ntBASIC17.32■□□□□ 0.36
RITA1Q96K30 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.32■□□□□ 0.36
RITA1Q96K30 AC005837.3-201ENST00000612163 286 ntBASIC17.32■□□□□ 0.36
RITA1Q96K30 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.32■□□□□ 0.36
RITA1Q96K30 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RITA1Q96K30 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 CLDN5-201ENST00000403084 2357 ntBASIC17.31■□□□□ 0.36
RITA1Q96K30 RASA4CP-201ENST00000424092 1398 ntBASIC17.31■□□□□ 0.36
RITA1Q96K30 TSPY26P-201ENST00000476365 1326 ntBASIC17.31■□□□□ 0.36
RITA1Q96K30 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RITA1Q96K30 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
RITA1Q96K30 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RITA1Q96K30 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.31■□□□□ 0.36
RITA1Q96K30 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
RITA1Q96K30 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RITA1Q96K30 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.3■□□□□ 0.36
RITA1Q96K30 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RITA1Q96K30 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.3■□□□□ 0.36
RITA1Q96K30 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.3■□□□□ 0.36
RITA1Q96K30 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.3■□□□□ 0.36
RITA1Q96K30 IGHV3-19-201ENST00000521488 291 ntBASIC17.3■□□□□ 0.36
RITA1Q96K30 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.3■□□□□ 0.36
RITA1Q96K30 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RITA1Q96K30 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
RITA1Q96K30 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 AC010542.4-201ENST00000563151 1910 ntBASIC17.29■□□□□ 0.36
RITA1Q96K30 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.29■□□□□ 0.36
RITA1Q96K30 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 MIR638-201ENST00000385237 100 ntBASIC17.29■□□□□ 0.36
RITA1Q96K30 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.29■□□□□ 0.36
RITA1Q96K30 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
RITA1Q96K30 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RITA1Q96K30 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.29■□□□□ 0.36
RITA1Q96K30 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RITA1Q96K30 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.28■□□□□ 0.36
RITA1Q96K30 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RITA1Q96K30 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RITA1Q96K30 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RITA1Q96K30 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
RITA1Q96K30 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RITA1Q96K30 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RITA1Q96K30 AC091305.1-201ENST00000479476 895 ntBASIC17.28■□□□□ 0.36
RITA1Q96K30 SMUG1P1-201ENST00000590640 811 ntBASIC17.28■□□□□ 0.36
RITA1Q96K30 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms