Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 AC006455.2-201ENST00000429931 906 ntBASIC21.6■■□□□ 1.05
NAF1Q96HR8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 AL031602.1-201ENST00000633169 911 ntBASIC21.6■■□□□ 1.05
NAF1Q96HR8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
NAF1Q96HR8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NAF1Q96HR8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 FBXW4P1-201ENST00000426721 2239 ntBASIC21.59■■□□□ 1.05
NAF1Q96HR8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 AC136469.2-201ENST00000623944 1028 ntBASIC21.59■■□□□ 1.05
NAF1Q96HR8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NAF1Q96HR8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.59■■□□□ 1.05
NAF1Q96HR8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NAF1Q96HR8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NAF1Q96HR8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
NAF1Q96HR8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NAF1Q96HR8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NAF1Q96HR8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NAF1Q96HR8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.58■■□□□ 1.05
NAF1Q96HR8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.58■■□□□ 1.05
NAF1Q96HR8 AC092437.1-201ENST00000624794 1048 ntBASIC21.58■■□□□ 1.05
NAF1Q96HR8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.58■■□□□ 1.04
NAF1Q96HR8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NAF1Q96HR8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.58■■□□□ 1.04
NAF1Q96HR8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
NAF1Q96HR8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.58■■□□□ 1.04
NAF1Q96HR8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NAF1Q96HR8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
NAF1Q96HR8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NAF1Q96HR8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NAF1Q96HR8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.57■■□□□ 1.04
NAF1Q96HR8 SLC47A1P1-202ENST00000449666 945 ntBASIC21.57■■□□□ 1.04
NAF1Q96HR8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
NAF1Q96HR8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.57■■□□□ 1.04
NAF1Q96HR8 AC126544.1-201ENST00000580842 1059 ntBASIC21.57■■□□□ 1.04
NAF1Q96HR8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NAF1Q96HR8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.56■■□□□ 1.04
NAF1Q96HR8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NAF1Q96HR8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.56■■□□□ 1.04
NAF1Q96HR8 BX842568.3-201ENST00000418104 571 ntBASIC21.56■■□□□ 1.04
NAF1Q96HR8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NAF1Q96HR8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 AC131274.2-201ENST00000580697 1507 ntBASIC21.55■■□□□ 1.04
NAF1Q96HR8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NAF1Q96HR8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.55■■□□□ 1.04
NAF1Q96HR8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms