Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL031602.1-201ENST00000633169 911 ntBASIC25.53■■□□□ 1.68
DDX11Q96FC9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX11Q96FC9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
DDX11Q96FC9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
DDX11Q96FC9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
DDX11Q96FC9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX11Q96FC9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX11Q96FC9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX11Q96FC9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.52■■□□□ 1.68
DDX11Q96FC9 MIR6084-201ENST00000622012 110 ntBASIC25.52■■□□□ 1.68
DDX11Q96FC9 AC137767.1-201ENST00000602918 1920 ntBASIC25.52■■□□□ 1.68
DDX11Q96FC9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
DDX11Q96FC9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
DDX11Q96FC9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX11Q96FC9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX11Q96FC9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 AC027612.3-201ENST00000413684 1047 ntBASIC25.51■■□□□ 1.67
DDX11Q96FC9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 AC092053.2-201ENST00000640557 1818 ntBASIC25.51■■□□□ 1.67
DDX11Q96FC9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX11Q96FC9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX11Q96FC9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX11Q96FC9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX11Q96FC9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX11Q96FC9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX11Q96FC9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 OR2I1P-207ENST00000453522 948 ntBASIC25.5■■□□□ 1.67
DDX11Q96FC9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX11Q96FC9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.5■■□□□ 1.67
DDX11Q96FC9 AC012414.1-201ENST00000556676 535 ntBASIC25.5■■□□□ 1.67
DDX11Q96FC9 AL354811.1-201ENST00000610286 706 ntBASIC25.5■■□□□ 1.67
DDX11Q96FC9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 CLDN5-201ENST00000403084 2357 ntBASIC25.49■■□□□ 1.67
DDX11Q96FC9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX11Q96FC9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
DDX11Q96FC9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 AC123595.1-201ENST00000440769 1046 ntBASIC25.49■■□□□ 1.67
DDX11Q96FC9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.49■■□□□ 1.67
DDX11Q96FC9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.49■■□□□ 1.67
DDX11Q96FC9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX11Q96FC9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX11Q96FC9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 KRT18P5-201ENST00000436075 1291 ntBASIC25.48■■□□□ 1.67
DDX11Q96FC9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX11Q96FC9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
DDX11Q96FC9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX11Q96FC9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.47■■□□□ 1.67
DDX11Q96FC9 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.47■■□□□ 1.67
DDX11Q96FC9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX11Q96FC9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX11Q96FC9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX11Q96FC9 DUX4L2-201ENST00000561772 1275 ntBASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms