Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
USP7Q93009 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP7Q93009 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
USP7Q93009 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.24■□□□□ 0.99
USP7Q93009 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.24■□□□□ 0.99
USP7Q93009 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP7Q93009 AC092437.1-201ENST00000624794 1048 ntBASIC21.24■□□□□ 0.99
USP7Q93009 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP7Q93009 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
USP7Q93009 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP7Q93009 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP7Q93009 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP7Q93009 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP7Q93009 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP7Q93009 CCDC92B-201ENST00000575506 885 ntBASIC21.23■□□□□ 0.99
USP7Q93009 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.23■□□□□ 0.99
USP7Q93009 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP7Q93009 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.22■□□□□ 0.99
USP7Q93009 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.22■□□□□ 0.99
USP7Q93009 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.22■□□□□ 0.99
USP7Q93009 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.22■□□□□ 0.99
USP7Q93009 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.22■□□□□ 0.99
USP7Q93009 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.22■□□□□ 0.99
USP7Q93009 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP7Q93009 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
USP7Q93009 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP7Q93009 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.21■□□□□ 0.99
USP7Q93009 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.21■□□□□ 0.99
USP7Q93009 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
USP7Q93009 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 AC004911.1-201ENST00000416316 871 ntBASIC21.21■□□□□ 0.99
USP7Q93009 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.21■□□□□ 0.99
USP7Q93009 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.21■□□□□ 0.99
USP7Q93009 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.21■□□□□ 0.99
USP7Q93009 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.21■□□□□ 0.99
USP7Q93009 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP7Q93009 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP7Q93009 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP7Q93009 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 AC092053.2-201ENST00000640557 1818 ntBASIC21.2■□□□□ 0.98
USP7Q93009 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.2■□□□□ 0.98
USP7Q93009 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.2■□□□□ 0.98
USP7Q93009 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.2■□□□□ 0.98
USP7Q93009 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.2■□□□□ 0.98
USP7Q93009 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 OR2I1P-207ENST00000453522 948 ntBASIC21.2■□□□□ 0.98
USP7Q93009 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP7Q93009 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP7Q93009 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP7Q93009 LINC01960-201ENST00000563759 1884 ntBASIC21.2■□□□□ 0.98
USP7Q93009 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP7Q93009 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
USP7Q93009 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
USP7Q93009 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.19■□□□□ 0.98
USP7Q93009 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP7Q93009 NTF6G-201ENST00000591094 616 ntBASIC21.19■□□□□ 0.98
USP7Q93009 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.19■□□□□ 0.98
USP7Q93009 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms