Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 AC009237.3-201ENST00000393279 1427 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 LINC02228-203ENST00000641970 1355 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L2-201ENST00000561772 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 AL034346.1-201ENST00000568244 1277 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L6-201ENST00000626483 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L1-201ENST00000627662 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L8-201ENST00000629013 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L3-201ENST00000630187 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L7-201ENST00000630678 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 DUX4L5-201ENST00000630834 1275 ntBASIC25.47■■□□□ 1.67
STAG1Q8WVM7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG1Q8WVM7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 ECEL1P1-201ENST00000373592 1742 ntBASIC25.46■■□□□ 1.67
STAG1Q8WVM7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 TERF1P2-201ENST00000583350 1212 ntBASIC25.46■■□□□ 1.67
STAG1Q8WVM7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG1Q8WVM7 AC005224.4-201ENST00000583262 1652 ntBASIC25.45■■□□□ 1.67
STAG1Q8WVM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.67
STAG1Q8WVM7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
STAG1Q8WVM7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.45■■□□□ 1.67
STAG1Q8WVM7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
STAG1Q8WVM7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 AC092053.2-201ENST00000640557 1818 ntBASIC25.45■■□□□ 1.66
STAG1Q8WVM7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG1Q8WVM7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 CCDC92B-201ENST00000575506 885 ntBASIC25.44■■□□□ 1.66
STAG1Q8WVM7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.44■■□□□ 1.66
STAG1Q8WVM7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
STAG1Q8WVM7 AL117328.2-201ENST00000624617 1940 ntBASIC25.43■■□□□ 1.66
STAG1Q8WVM7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 AC055733.4-201ENST00000638462 1354 ntBASIC25.42■■□□□ 1.66
STAG1Q8WVM7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.42■■□□□ 1.66
STAG1Q8WVM7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
STAG1Q8WVM7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
STAG1Q8WVM7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
STAG1Q8WVM7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
STAG1Q8WVM7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms