Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
SSH3Q8TE77 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.76■■□□□ 1.87
SSH3Q8TE77 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SSH3Q8TE77 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
SSH3Q8TE77 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.75■■□□□ 1.87
SSH3Q8TE77 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SSH3Q8TE77 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SSH3Q8TE77 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.75■■□□□ 1.87
SSH3Q8TE77 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SSH3Q8TE77 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.75■■□□□ 1.87
SSH3Q8TE77 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SSH3Q8TE77 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.75■■□□□ 1.87
SSH3Q8TE77 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SSH3Q8TE77 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SSH3Q8TE77 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SSH3Q8TE77 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SSH3Q8TE77 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SSH3Q8TE77 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.74■■□□□ 1.87
SSH3Q8TE77 AL034346.1-201ENST00000568244 1277 ntBASIC26.74■■□□□ 1.87
SSH3Q8TE77 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
SSH3Q8TE77 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SSH3Q8TE77 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SSH3Q8TE77 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SSH3Q8TE77 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.73■■□□□ 1.87
SSH3Q8TE77 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
SSH3Q8TE77 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SSH3Q8TE77 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SSH3Q8TE77 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SSH3Q8TE77 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SSH3Q8TE77 AC123595.1-201ENST00000440769 1046 ntBASIC26.72■■□□□ 1.87
SSH3Q8TE77 YBX1P1-201ENST00000445822 960 ntBASIC26.72■■□□□ 1.87
SSH3Q8TE77 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.72■■□□□ 1.87
SSH3Q8TE77 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.72■■□□□ 1.87
SSH3Q8TE77 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SSH3Q8TE77 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.72■■□□□ 1.87
SSH3Q8TE77 AC009237.3-201ENST00000393279 1427 ntBASIC26.72■■□□□ 1.87
SSH3Q8TE77 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.71■■□□□ 1.87
SSH3Q8TE77 AC005224.4-201ENST00000583262 1652 ntBASIC26.71■■□□□ 1.87
SSH3Q8TE77 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SSH3Q8TE77 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
SSH3Q8TE77 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SSH3Q8TE77 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SSH3Q8TE77 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SSH3Q8TE77 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SSH3Q8TE77 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.7■■□□□ 1.86
SSH3Q8TE77 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.7■■□□□ 1.86
SSH3Q8TE77 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.7■■□□□ 1.86
SSH3Q8TE77 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SSH3Q8TE77 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.7■■□□□ 1.86
SSH3Q8TE77 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SSH3Q8TE77 AC055733.4-201ENST00000638462 1354 ntBASIC26.7■■□□□ 1.86
SSH3Q8TE77 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SSH3Q8TE77 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SSH3Q8TE77 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SSH3Q8TE77 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SSH3Q8TE77 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.69■■□□□ 1.86
SSH3Q8TE77 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SSH3Q8TE77 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
SSH3Q8TE77 AC026271.2-201ENST00000428091 497 ntBASIC26.69■■□□□ 1.86
SSH3Q8TE77 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.69■■□□□ 1.86
SSH3Q8TE77 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.69■■□□□ 1.86
SSH3Q8TE77 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.69■■□□□ 1.86
SSH3Q8TE77 FAM99A-202ENST00000538190 1989 ntBASIC26.69■■□□□ 1.86
SSH3Q8TE77 AC026471.6-201ENST00000622954 1905 ntBASIC26.69■■□□□ 1.86
SSH3Q8TE77 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.68■■□□□ 1.86
SSH3Q8TE77 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.68■■□□□ 1.86
SSH3Q8TE77 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SSH3Q8TE77 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSH3Q8TE77 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.67■■□□□ 1.86
SSH3Q8TE77 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSH3Q8TE77 AP006587.3-201ENST00000525742 1516 ntBASIC26.67■■□□□ 1.86
SSH3Q8TE77 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSH3Q8TE77 AC097381.1-201ENST00000429019 1296 ntBASIC26.67■■□□□ 1.86
SSH3Q8TE77 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.67■■□□□ 1.86
SSH3Q8TE77 MIR6821-201ENST00000617625 74 ntBASIC26.67■■□□□ 1.86
SSH3Q8TE77 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.67■■□□□ 1.86
SSH3Q8TE77 C11orf96-202ENST00000528572 1834 ntBASIC26.67■■□□□ 1.86
SSH3Q8TE77 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
SSH3Q8TE77 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SSH3Q8TE77 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SSH3Q8TE77 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SSH3Q8TE77 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms