Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 AC239859.2-201ENST00000444165 318 ntBASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y2Q8TD47 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 MTDHP2-201ENST00000601468 714 ntBASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y2Q8TD47 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y2Q8TD47 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 AC104564.3-201ENST00000582367 638 ntBASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.83■□□□□ 0.6
RPS4Y2Q8TD47 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4Y2Q8TD47 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 OR7E47P-201ENST00000546390 1422 ntBASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4Y2Q8TD47 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 LINC01521-201ENST00000504184 1943 ntBASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms