Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXD3Q8N9H8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 AC069152.1-201ENST00000438030 544 ntBASIC20.28■□□□□ 0.84
EXD3Q8N9H8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXD3Q8N9H8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EXD3Q8N9H8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EXD3Q8N9H8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EXD3Q8N9H8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EXD3Q8N9H8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.25■□□□□ 0.83
EXD3Q8N9H8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 AC005181.1-201ENST00000604782 1256 ntBASIC20.24■□□□□ 0.83
EXD3Q8N9H8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EXD3Q8N9H8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms