Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC9BQ8N6N2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.23
TTC9BQ8N6N2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC9BQ8N6N2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 AC011767.1-201ENST00000617410 1153 ntBASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TTC9BQ8N6N2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 BID-214ENST00000617586 542 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC9BQ8N6N2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TTC9BQ8N6N2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC9BQ8N6N2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 C1orf229-201ENST00000623686 2258 ntBASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 AC139530.1-201ENST00000575312 1977 ntBASIC22.65■■□□□ 1.22
TTC9BQ8N6N2 ID1-201ENST00000376105 1233 ntBASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC9BQ8N6N2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 MFSD11-216ENST00000590393 1141 ntBASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms