Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 AC010997.5-201ENST00000609182 354 ntBASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 AC087239.1-201ENST00000622671 572 ntBASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 AC092667.1-201ENST00000434301 2586 ntBASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC01561Q8N1V8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 AL034346.1-201ENST00000568244 1277 ntBASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MIR4787-201ENST00000607364 84 ntBASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 AL117332.1-201ENST00000622628 974 ntBASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 FEM1AP4-201ENST00000443167 1987 ntBASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01561Q8N1V8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 AC133637.1-201ENST00000624115 1537 ntBASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LINC01561Q8N1V8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LINC01561Q8N1V8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01561Q8N1V8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms