Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC116Q8IYX3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC116Q8IYX3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.29■□□□□ 0.84
CCDC116Q8IYX3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC116Q8IYX3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 FAM99A-202ENST00000538190 1989 ntBASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 AP001330.3-201ENST00000520123 633 ntBASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 AC027682.1-201ENST00000562846 899 ntBASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 AC133561.4-201ENST00000566112 224 ntBASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 AL031432.3-201ENST00000607698 485 ntBASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC116Q8IYX3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC116Q8IYX3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC116Q8IYX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC116Q8IYX3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 AF213884.3-201ENST00000563833 479 ntBASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC116Q8IYX3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 IGHV3-19-201ENST00000521488 291 ntBASIC20.25■□□□□ 0.83
CCDC116Q8IYX3 AL136967.2-201ENST00000623968 743 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms