Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 RASA4CP-201ENST00000424092 1398 ntBASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 AC091305.1-201ENST00000479476 895 ntBASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC65Q8IXS2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 AL136967.2-201ENST00000623968 743 ntBASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 FAM99A-202ENST00000538190 1989 ntBASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC65Q8IXS2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC65Q8IXS2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 TSPY26P-201ENST00000476365 1326 ntBASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 SUDS3P1-201ENST00000505831 966 ntBASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC65Q8IXS2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC65Q8IXS2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 AL034346.1-201ENST00000568244 1277 ntBASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC65Q8IXS2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC65Q8IXS2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 AC142381.2-201ENST00000566120 298 ntBASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 SMUG1P1-201ENST00000590640 811 ntBASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC65Q8IXS2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms