Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL23A1Q86Y22 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL23A1Q86Y22 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
COL23A1Q86Y22 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL23A1Q86Y22 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL23A1Q86Y22 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 LINC00543-201ENST00000567234 1845 ntBASIC27.41■■□□□ 1.98
COL23A1Q86Y22 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.41■■□□□ 1.98
COL23A1Q86Y22 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 AC097658.1-201ENST00000475555 843 ntBASIC27.4■■□□□ 1.98
COL23A1Q86Y22 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
COL23A1Q86Y22 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL23A1Q86Y22 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL23A1Q86Y22 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.39■■□□□ 1.98
COL23A1Q86Y22 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.39■■□□□ 1.98
COL23A1Q86Y22 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
COL23A1Q86Y22 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
COL23A1Q86Y22 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 UNC93B4-201ENST00000505679 747 ntBASIC27.38■■□□□ 1.97
COL23A1Q86Y22 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.38■■□□□ 1.97
COL23A1Q86Y22 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
COL23A1Q86Y22 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 AC008694.1-202ENST00000636953 945 ntBASIC27.36■■□□□ 1.97
COL23A1Q86Y22 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL23A1Q86Y22 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 AC091874.3-201ENST00000512672 1195 ntBASIC27.35■■□□□ 1.97
COL23A1Q86Y22 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 AC069236.1-201ENST00000604339 616 ntBASIC27.35■■□□□ 1.97
COL23A1Q86Y22 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL23A1Q86Y22 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
COL23A1Q86Y22 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms