Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3HC1Q86WB0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 AC131281.2-201ENST00000520478 145 ntBASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 DUX4L19-201ENST00000557448 1267 ntBASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ZC3HC1Q86WB0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3HC1Q86WB0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 AC136469.2-201ENST00000623944 1028 ntBASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 Z98882.1-201ENST00000622160 2253 ntBASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3HC1Q86WB0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 AC011298.3-201ENST00000615796 283 ntBASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZC3HC1Q86WB0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.39■■□□□ 1.02
ZC3HC1Q86WB0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.39■■□□□ 1.02
ZC3HC1Q86WB0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ZC3HC1Q86WB0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.39■■□□□ 1.02
ZC3HC1Q86WB0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
ZC3HC1Q86WB0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZC3HC1Q86WB0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 AC005229.4-201ENST00000610085 2198 ntBASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZC3HC1Q86WB0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms