Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD2Q7Z408 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CSMD2Q7Z408 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 LINC00543-201ENST00000567234 1845 ntBASIC18.39■□□□□ 0.53
CSMD2Q7Z408 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 RCN1P1-201ENST00000400413 996 ntBASIC18.39■□□□□ 0.53
CSMD2Q7Z408 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CSMD2Q7Z408 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.38■□□□□ 0.53
CSMD2Q7Z408 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 KRT18P21-201ENST00000515767 1272 ntBASIC18.37■□□□□ 0.53
CSMD2Q7Z408 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSMD2Q7Z408 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 AP001160.3-201ENST00000601484 763 ntBASIC18.36■□□□□ 0.53
CSMD2Q7Z408 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 AC091874.3-201ENST00000512672 1195 ntBASIC18.36■□□□□ 0.53
CSMD2Q7Z408 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.36■□□□□ 0.53
CSMD2Q7Z408 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.35■□□□□ 0.53
CSMD2Q7Z408 BX088651.1-201ENST00000540551 451 ntBASIC18.35■□□□□ 0.53
CSMD2Q7Z408 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms