Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NHLRC1Q6VVB1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC1Q6VVB1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 C11orf96-202ENST00000528572 1834 ntBASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 EDA-201ENST00000338901 1233 ntBASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
NHLRC1Q6VVB1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 SUDS3P1-201ENST00000505831 966 ntBASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC1Q6VVB1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 AP001330.3-201ENST00000520123 633 ntBASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 AL139246.5-201ENST00000606645 996 ntBASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 AC087239.1-201ENST00000622671 572 ntBASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 AL136967.2-201ENST00000623968 743 ntBASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC1Q6VVB1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 AL355001.2-201ENST00000620617 1191 ntBASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NHLRC1Q6VVB1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NHLRC1Q6VVB1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms