Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00242Q5T6M2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00242Q5T6M2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00242Q5T6M2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
LINC00242Q5T6M2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 AL157384.1-201ENST00000445995 2473 ntBASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 KRT8P33-201ENST00000508125 1423 ntBASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00242Q5T6M2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC00242Q5T6M2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 AL031848.2-201ENST00000607670 837 ntBASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 LINC01521-201ENST00000504184 1943 ntBASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00242Q5T6M2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 C17orf82-201ENST00000623772 1530 ntBASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00242Q5T6M2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00242Q5T6M2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms