Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.58■□□□□ 0.89
SPIN4Q56A73 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.58■□□□□ 0.89
SPIN4Q56A73 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPIN4Q56A73 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.58■□□□□ 0.89
SPIN4Q56A73 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SPIN4Q56A73 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPIN4Q56A73 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SPIN4Q56A73 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPIN4Q56A73 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPIN4Q56A73 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SPIN4Q56A73 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.57■□□□□ 0.88
SPIN4Q56A73 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SPIN4Q56A73 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SPIN4Q56A73 PKD1P6-201ENST00000343738 4769 ntBASIC20.57■□□□□ 0.88
SPIN4Q56A73 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPIN4Q56A73 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPIN4Q56A73 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPIN4Q56A73 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPIN4Q56A73 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SPIN4Q56A73 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPIN4Q56A73 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPIN4Q56A73 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPIN4Q56A73 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPIN4Q56A73 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPIN4Q56A73 AC244015.2-201ENST00000616358 1861 ntBASIC20.56■□□□□ 0.88
SPIN4Q56A73 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPIN4Q56A73 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SPIN4Q56A73 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SPIN4Q56A73 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPIN4Q56A73 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPIN4Q56A73 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
SPIN4Q56A73 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.55■□□□□ 0.88
SPIN4Q56A73 AL034346.1-201ENST00000568244 1277 ntBASIC20.55■□□□□ 0.88
SPIN4Q56A73 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPIN4Q56A73 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPIN4Q56A73 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
SPIN4Q56A73 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 UNC93B3-201ENST00000308076 687 ntBASIC20.54■□□□□ 0.88
SPIN4Q56A73 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPIN4Q56A73 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SPIN4Q56A73 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 BX842568.3-201ENST00000418104 571 ntBASIC20.53■□□□□ 0.88
SPIN4Q56A73 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 MIR4767-201ENST00000582827 78 ntBASIC20.53■□□□□ 0.88
SPIN4Q56A73 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 AC007375.3-201ENST00000600936 2314 ntBASIC20.53■□□□□ 0.88
SPIN4Q56A73 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPIN4Q56A73 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPIN4Q56A73 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPIN4Q56A73 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPIN4Q56A73 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SPIN4Q56A73 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPIN4Q56A73 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPIN4Q56A73 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPIN4Q56A73 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.52■□□□□ 0.87
SPIN4Q56A73 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 AC008406.3-201ENST00000620001 1374 ntBASIC20.51■□□□□ 0.87
SPIN4Q56A73 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 AL136162.1-201ENST00000607711 1078 ntBASIC20.51■□□□□ 0.87
SPIN4Q56A73 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SPIN4Q56A73 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPIN4Q56A73 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SPIN4Q56A73 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.51■□□□□ 0.87
SPIN4Q56A73 AC135279.3-201ENST00000610945 1311 ntBASIC20.51■□□□□ 0.87
SPIN4Q56A73 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SPIN4Q56A73 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPIN4Q56A73 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms