Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.59□□□□□ -0.23
HSPG2P98160 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.59□□□□□ -0.23
HSPG2P98160 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HSPG2P98160 AC004687.1-201ENST00000579003 1625 ntBASIC13.59□□□□□ -0.23
HSPG2P98160 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.59□□□□□ -0.23
HSPG2P98160 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HSPG2P98160 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HSPG2P98160 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HSPG2P98160 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HSPG2P98160 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.58□□□□□ -0.23
HSPG2P98160 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.58□□□□□ -0.23
HSPG2P98160 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.58□□□□□ -0.24
HSPG2P98160 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
HSPG2P98160 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.58□□□□□ -0.24
HSPG2P98160 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.58□□□□□ -0.24
HSPG2P98160 OR10C1-204ENST00000622521 1039 ntBASIC13.58□□□□□ -0.24
HSPG2P98160 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HSPG2P98160 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.58□□□□□ -0.24
HSPG2P98160 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
HSPG2P98160 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HSPG2P98160 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.57□□□□□ -0.24
HSPG2P98160 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.57□□□□□ -0.24
HSPG2P98160 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC13.57□□□□□ -0.24
HSPG2P98160 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HSPG2P98160 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HSPG2P98160 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 OXCT2P1-201ENST00000447263 1535 ntBASIC13.57□□□□□ -0.24
HSPG2P98160 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HSPG2P98160 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.57□□□□□ -0.24
HSPG2P98160 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC13.57□□□□□ -0.24
HSPG2P98160 LINC01529-204ENST00000636474 1715 ntBASIC13.57□□□□□ -0.24
HSPG2P98160 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.57□□□□□ -0.24
HSPG2P98160 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.57□□□□□ -0.24
HSPG2P98160 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.57□□□□□ -0.24
HSPG2P98160 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.57□□□□□ -0.24
HSPG2P98160 C2orf69P4-201ENST00000565394 541 ntBASIC13.57□□□□□ -0.24
HSPG2P98160 AC016405.3-201ENST00000607710 860 ntBASIC13.57□□□□□ -0.24
HSPG2P98160 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HSPG2P98160 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.56□□□□□ -0.24
HSPG2P98160 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HSPG2P98160 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.56□□□□□ -0.24
HSPG2P98160 AC233263.1-201ENST00000578059 224 ntBASIC13.56□□□□□ -0.24
HSPG2P98160 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.56□□□□□ -0.24
HSPG2P98160 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
HSPG2P98160 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
HSPG2P98160 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HSPG2P98160 C1QBPP2-201ENST00000528754 825 ntBASIC13.56□□□□□ -0.24
HSPG2P98160 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.56□□□□□ -0.24
HSPG2P98160 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.56□□□□□ -0.24
HSPG2P98160 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
HSPG2P98160 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.55□□□□□ -0.24
HSPG2P98160 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.55□□□□□ -0.24
HSPG2P98160 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
HSPG2P98160 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.55□□□□□ -0.24
HSPG2P98160 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.55□□□□□ -0.24
HSPG2P98160 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.55□□□□□ -0.24
HSPG2P98160 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.55□□□□□ -0.24
HSPG2P98160 REXO1L12P-201ENST00000622156 912 ntBASIC13.55□□□□□ -0.24
HSPG2P98160 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.55□□□□□ -0.24
HSPG2P98160 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HSPG2P98160 RN7SL850P-201ENST00000579959 291 ntBASIC13.55□□□□□ -0.24
HSPG2P98160 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.55□□□□□ -0.24
HSPG2P98160 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 AC010141.2-201ENST00000452426 721 ntBASIC13.54□□□□□ -0.24
HSPG2P98160 AC097658.1-201ENST00000475555 843 ntBASIC13.54□□□□□ -0.24
HSPG2P98160 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.54□□□□□ -0.24
HSPG2P98160 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HSPG2P98160 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms