Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC016405.3-201ENST00000607710 860 ntBASIC15.88■□□□□ 0.13
PRKDCP78527 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKDCP78527 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKDCP78527 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
PRKDCP78527 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRKDCP78527 C1QBPP2-201ENST00000528754 825 ntBASIC15.88■□□□□ 0.13
PRKDCP78527 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.88■□□□□ 0.13
PRKDCP78527 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRKDCP78527 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRKDCP78527 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKDCP78527 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKDCP78527 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKDCP78527 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKDCP78527 OR10C1-204ENST00000622521 1039 ntBASIC15.87■□□□□ 0.13
PRKDCP78527 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.87■□□□□ 0.13
PRKDCP78527 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKDCP78527 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.87■□□□□ 0.13
PRKDCP78527 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRKDCP78527 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKDCP78527 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.87■□□□□ 0.13
PRKDCP78527 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PRKDCP78527 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.87■□□□□ 0.13
PRKDCP78527 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PRKDCP78527 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.86■□□□□ 0.13
PRKDCP78527 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.86■□□□□ 0.13
PRKDCP78527 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC15.86■□□□□ 0.13
PRKDCP78527 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRKDCP78527 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.86■□□□□ 0.13
PRKDCP78527 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRKDCP78527 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.86■□□□□ 0.13
PRKDCP78527 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PRKDCP78527 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PRKDCP78527 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.85■□□□□ 0.13
PRKDCP78527 AC097658.1-201ENST00000475555 843 ntBASIC15.85■□□□□ 0.13
PRKDCP78527 CYP2T3P-201ENST00000601990 817 ntBASIC15.85■□□□□ 0.13
PRKDCP78527 AC004687.1-201ENST00000579003 1625 ntBASIC15.85■□□□□ 0.13
PRKDCP78527 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRKDCP78527 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PRKDCP78527 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKDCP78527 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 ARMC10P1-201ENST00000313754 855 ntBASIC15.84■□□□□ 0.13
PRKDCP78527 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKDCP78527 AC009237.3-201ENST00000393279 1427 ntBASIC15.84■□□□□ 0.13
PRKDCP78527 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKDCP78527 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.84■□□□□ 0.13
PRKDCP78527 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKDCP78527 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKDCP78527 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKDCP78527 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRKDCP78527 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.83■□□□□ 0.13
PRKDCP78527 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKDCP78527 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.83■□□□□ 0.13
PRKDCP78527 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PRKDCP78527 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKDCP78527 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKDCP78527 AC012618.2-201ENST00000428058 849 ntBASIC15.83■□□□□ 0.12
PRKDCP78527 RPPH1-201ENST00000516869 333 ntBASIC15.83■□□□□ 0.12
PRKDCP78527 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.83■□□□□ 0.12
PRKDCP78527 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.83■□□□□ 0.12
PRKDCP78527 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.83■□□□□ 0.12
PRKDCP78527 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKDCP78527 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKDCP78527 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKDCP78527 TMPOP1-202ENST00000424642 1267 ntBASIC15.83■□□□□ 0.12
PRKDCP78527 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PRKDCP78527 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms