Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX6-1P78426 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
NKX6-1P78426 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX6-1P78426 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.9■□□□□ 0.62
NKX6-1P78426 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX6-1P78426 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX6-1P78426 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX6-1P78426 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX6-1P78426 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NKX6-1P78426 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
NKX6-1P78426 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.89■□□□□ 0.62
NKX6-1P78426 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NKX6-1P78426 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX6-1P78426 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX6-1P78426 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX6-1P78426 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.89■□□□□ 0.61
NKX6-1P78426 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NKX6-1P78426 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NKX6-1P78426 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX6-1P78426 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX6-1P78426 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 AC016769.1-201ENST00000409132 1010 ntBASIC18.88■□□□□ 0.61
NKX6-1P78426 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX6-1P78426 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX6-1P78426 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.88■□□□□ 0.61
NKX6-1P78426 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.88■□□□□ 0.61
NKX6-1P78426 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX6-1P78426 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX6-1P78426 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NKX6-1P78426 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX6-1P78426 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.87■□□□□ 0.61
NKX6-1P78426 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX6-1P78426 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX6-1P78426 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.87■□□□□ 0.61
NKX6-1P78426 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX6-1P78426 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX6-1P78426 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX6-1P78426 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX6-1P78426 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX6-1P78426 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NKX6-1P78426 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NKX6-1P78426 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NKX6-1P78426 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX6-1P78426 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX6-1P78426 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NKX6-1P78426 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NKX6-1P78426 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.85■□□□□ 0.61
NKX6-1P78426 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX6-1P78426 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NKX6-1P78426 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX6-1P78426 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.85■□□□□ 0.61
NKX6-1P78426 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-1P78426 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX6-1P78426 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NKX6-1P78426 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.84■□□□□ 0.61
NKX6-1P78426 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX6-1P78426 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.84■□□□□ 0.61
NKX6-1P78426 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NKX6-1P78426 AC137761.2-201ENST00000561729 223 ntBASIC18.84■□□□□ 0.61
NKX6-1P78426 AC145350.3-201ENST00000569033 163 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms