Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GABREP78334 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
GABREP78334 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GABREP78334 AC073210.2-201ENST00000430369 194 ntBASIC20.53■□□□□ 0.88
GABREP78334 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 AC133552.2-202ENST00000575694 574 ntBASIC20.53■□□□□ 0.88
GABREP78334 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.53■□□□□ 0.88
GABREP78334 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.53■□□□□ 0.88
GABREP78334 DUSP8P3-201ENST00000399571 1760 ntBASIC20.53■□□□□ 0.88
GABREP78334 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABREP78334 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.52■□□□□ 0.88
GABREP78334 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABREP78334 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABREP78334 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABREP78334 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GABREP78334 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.52■□□□□ 0.88
GABREP78334 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.52■□□□□ 0.88
GABREP78334 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GABREP78334 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
GABREP78334 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
GABREP78334 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GABREP78334 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GABREP78334 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
GABREP78334 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
GABREP78334 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
GABREP78334 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.51■□□□□ 0.87
GABREP78334 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.51■□□□□ 0.87
GABREP78334 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.51■□□□□ 0.87
GABREP78334 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.51■□□□□ 0.87
GABREP78334 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.51■□□□□ 0.87
GABREP78334 AC008687.6-201ENST00000596318 630 ntBASIC20.51■□□□□ 0.87
GABREP78334 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 AC010536.3-201ENST00000620306 533 ntBASIC20.51■□□□□ 0.87
GABREP78334 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABREP78334 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GABREP78334 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
GABREP78334 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABREP78334 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.5■□□□□ 0.87
GABREP78334 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABREP78334 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.5■□□□□ 0.87
GABREP78334 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABREP78334 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.5■□□□□ 0.87
GABREP78334 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.5■□□□□ 0.87
GABREP78334 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABREP78334 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABREP78334 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABREP78334 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GABREP78334 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABREP78334 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.49■□□□□ 0.87
GABREP78334 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.49■□□□□ 0.87
GABREP78334 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.49■□□□□ 0.87
GABREP78334 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GABREP78334 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABREP78334 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABREP78334 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABREP78334 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABREP78334 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.48■□□□□ 0.87
GABREP78334 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GABREP78334 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.48■□□□□ 0.87
GABREP78334 POU5F1P3-201ENST00000428824 1078 ntBASIC20.48■□□□□ 0.87
GABREP78334 AC010141.2-201ENST00000452426 721 ntBASIC20.48■□□□□ 0.87
GABREP78334 RNA5SP413-201ENST00000516373 109 ntBASIC20.48■□□□□ 0.87
GABREP78334 MIR4758-201ENST00000577688 71 ntBASIC20.48■□□□□ 0.87
GABREP78334 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.48■□□□□ 0.87
GABREP78334 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.48■□□□□ 0.87
GABREP78334 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABREP78334 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABREP78334 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.47■□□□□ 0.87
GABREP78334 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.47■□□□□ 0.87
GABREP78334 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.47■□□□□ 0.87
GABREP78334 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
GABREP78334 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.47■□□□□ 0.87
GABREP78334 KRT18P29-201ENST00000397031 1267 ntBASIC20.47■□□□□ 0.87
GABREP78334 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.47■□□□□ 0.87
GABREP78334 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.47■□□□□ 0.87
GABREP78334 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GABREP78334 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABREP78334 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms