Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM6P62312 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LSM6P62312 FBXW4P1-201ENST00000426721 2239 ntBASIC18.93■□□□□ 0.62
LSM6P62312 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LSM6P62312 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.93■□□□□ 0.62
LSM6P62312 AC096631.2-201ENST00000436136 790 ntBASIC18.93■□□□□ 0.62
LSM6P62312 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
LSM6P62312 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.93■□□□□ 0.62
LSM6P62312 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM6P62312 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM6P62312 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM6P62312 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LSM6P62312 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 AC010542.4-201ENST00000563151 1910 ntBASIC18.92■□□□□ 0.62
LSM6P62312 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.92■□□□□ 0.62
LSM6P62312 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.92■□□□□ 0.62
LSM6P62312 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 AC106739.1-201ENST00000617035 715 ntBASIC18.92■□□□□ 0.62
LSM6P62312 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LSM6P62312 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM6P62312 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LSM6P62312 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM6P62312 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
LSM6P62312 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LSM6P62312 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.91■□□□□ 0.62
LSM6P62312 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.91■□□□□ 0.62
LSM6P62312 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.91■□□□□ 0.62
LSM6P62312 PBX2P1-201ENST00000493219 1291 ntBASIC18.91■□□□□ 0.62
LSM6P62312 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM6P62312 AC133561.4-201ENST00000566112 224 ntBASIC18.91■□□□□ 0.62
LSM6P62312 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM6P62312 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM6P62312 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM6P62312 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM6P62312 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM6P62312 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LSM6P62312 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM6P62312 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LSM6P62312 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM6P62312 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.9■□□□□ 0.62
LSM6P62312 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 AC126544.1-201ENST00000580842 1059 ntBASIC18.9■□□□□ 0.62
LSM6P62312 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.9■□□□□ 0.62
LSM6P62312 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
LSM6P62312 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
LSM6P62312 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM6P62312 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM6P62312 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
LSM6P62312 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 EDA-201ENST00000338901 1233 ntBASIC18.89■□□□□ 0.61
LSM6P62312 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM6P62312 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LSM6P62312 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.89■□□□□ 0.61
LSM6P62312 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.89■□□□□ 0.61
LSM6P62312 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM6P62312 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LSM6P62312 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM6P62312 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LSM6P62312 IGHV3-19-201ENST00000521488 291 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms