Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 AC079630.1-202ENST00000618127 1840 ntBASIC18.72■□□□□ 0.59
SEC61A1P61619 AC092053.2-201ENST00000640557 1818 ntBASIC18.72■□□□□ 0.59
SEC61A1P61619 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.72■□□□□ 0.59
SEC61A1P61619 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.72■□□□□ 0.59
SEC61A1P61619 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.72■□□□□ 0.59
SEC61A1P61619 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.72■□□□□ 0.59
SEC61A1P61619 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SEC61A1P61619 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.72■□□□□ 0.59
SEC61A1P61619 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.72■□□□□ 0.59
SEC61A1P61619 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC61A1P61619 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC61A1P61619 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SEC61A1P61619 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A1P61619 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A1P61619 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A1P61619 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61A1P61619 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SEC61A1P61619 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SEC61A1P61619 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.71■□□□□ 0.59
SEC61A1P61619 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
SEC61A1P61619 DUX4L19-201ENST00000557448 1267 ntBASIC18.71■□□□□ 0.59
SEC61A1P61619 AC133561.4-201ENST00000566112 224 ntBASIC18.71■□□□□ 0.59
SEC61A1P61619 AC092171.4-201ENST00000609130 632 ntBASIC18.71■□□□□ 0.59
SEC61A1P61619 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.71■□□□□ 0.59
SEC61A1P61619 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SEC61A1P61619 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SEC61A1P61619 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A1P61619 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A1P61619 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.71■□□□□ 0.59
SEC61A1P61619 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC61A1P61619 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC61A1P61619 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SEC61A1P61619 AL031432.3-201ENST00000607698 485 ntBASIC18.7■□□□□ 0.58
SEC61A1P61619 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SEC61A1P61619 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC61A1P61619 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.7■□□□□ 0.58
SEC61A1P61619 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.7■□□□□ 0.58
SEC61A1P61619 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEC61A1P61619 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.7■□□□□ 0.58
SEC61A1P61619 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SEC61A1P61619 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC61A1P61619 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC61A1P61619 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC61A1P61619 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 AC009086.3-201ENST00000623486 1008 ntBASIC18.69■□□□□ 0.58
SEC61A1P61619 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SEC61A1P61619 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A1P61619 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SEC61A1P61619 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SEC61A1P61619 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.68■□□□□ 0.58
SEC61A1P61619 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.68■□□□□ 0.58
SEC61A1P61619 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.68■□□□□ 0.58
SEC61A1P61619 MIR4767-201ENST00000582827 78 ntBASIC18.68■□□□□ 0.58
SEC61A1P61619 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.68■□□□□ 0.58
SEC61A1P61619 AC241377.3-202ENST00000626088 1088 ntBASIC18.68■□□□□ 0.58
SEC61A1P61619 AC241585.3-202ENST00000628937 1088 ntBASIC18.68■□□□□ 0.58
SEC61A1P61619 AC245100.8-202ENST00000629247 1058 ntBASIC18.68■□□□□ 0.58
SEC61A1P61619 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.68■□□□□ 0.58
SEC61A1P61619 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A1P61619 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SEC61A1P61619 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.67■□□□□ 0.58
SEC61A1P61619 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A1P61619 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
SEC61A1P61619 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A1P61619 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A1P61619 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A1P61619 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SEC61A1P61619 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.67■□□□□ 0.58
SEC61A1P61619 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms