Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB38P57729 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB38P57729 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB38P57729 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB38P57729 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB38P57729 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB38P57729 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB38P57729 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB38P57729 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB38P57729 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB38P57729 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 AC009237.3-201ENST00000393279 1427 ntBASIC20.28■□□□□ 0.84
RAB38P57729 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB38P57729 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RAB38P57729 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB38P57729 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAB38P57729 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB38P57729 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB38P57729 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB38P57729 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB38P57729 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB38P57729 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 TPRG1LP1-201ENST00000598702 760 ntBASIC20.27■□□□□ 0.84
RAB38P57729 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAB38P57729 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB38P57729 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAB38P57729 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB38P57729 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB38P57729 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAB38P57729 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB38P57729 YBX1P1-201ENST00000445822 960 ntBASIC20.26■□□□□ 0.83
RAB38P57729 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB38P57729 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB38P57729 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB38P57729 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB38P57729 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB38P57729 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAB38P57729 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB38P57729 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RAB38P57729 AC123595.1-201ENST00000440769 1046 ntBASIC20.25■□□□□ 0.83
RAB38P57729 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB38P57729 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB38P57729 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB38P57729 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB38P57729 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB38P57729 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 AC005224.4-201ENST00000583262 1652 ntBASIC20.24■□□□□ 0.83
RAB38P57729 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RAB38P57729 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB38P57729 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB38P57729 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB38P57729 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
RAB38P57729 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB38P57729 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB38P57729 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB38P57729 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RAB38P57729 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 LINC02228-203ENST00000641970 1355 ntBASIC20.22■□□□□ 0.83
RAB38P57729 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB38P57729 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB38P57729 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB38P57729 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms