Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.03■□□□□ 0.16
CMC4P56277 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.03■□□□□ 0.16
CMC4P56277 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 YBX1P1-201ENST00000445822 960 ntBASIC16.03■□□□□ 0.16
CMC4P56277 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
CMC4P56277 LINC00526-201ENST00000581067 1875 ntBASIC16.03■□□□□ 0.16
CMC4P56277 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CMC4P56277 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.03■□□□□ 0.16
CMC4P56277 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 AC242852.2-201ENST00000615738 1807 ntBASIC16.03■□□□□ 0.16
CMC4P56277 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.02■□□□□ 0.16
CMC4P56277 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.02■□□□□ 0.16
CMC4P56277 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.02■□□□□ 0.16
CMC4P56277 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CMC4P56277 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.02■□□□□ 0.16
CMC4P56277 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.02■□□□□ 0.16
CMC4P56277 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.02■□□□□ 0.16
CMC4P56277 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.02■□□□□ 0.15
CMC4P56277 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CMC4P56277 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CMC4P56277 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CMC4P56277 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CMC4P56277 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.02■□□□□ 0.15
CMC4P56277 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CMC4P56277 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.02■□□□□ 0.15
CMC4P56277 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CMC4P56277 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CMC4P56277 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.01■□□□□ 0.15
CMC4P56277 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.01■□□□□ 0.15
CMC4P56277 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.01■□□□□ 0.15
CMC4P56277 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 C1orf229-201ENST00000623686 2258 ntBASIC16.01■□□□□ 0.15
CMC4P56277 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CMC4P56277 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CMC4P56277 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CMC4P56277 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16■□□□□ 0.15
CMC4P56277 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CMC4P56277 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CMC4P56277 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CMC4P56277 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
CMC4P56277 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CMC4P56277 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CMC4P56277 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CMC4P56277 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CMC4P56277 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 AC092053.2-201ENST00000640557 1818 ntBASIC15.99■□□□□ 0.15
CMC4P56277 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.99■□□□□ 0.15
CMC4P56277 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.99■□□□□ 0.15
CMC4P56277 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CMC4P56277 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.99■□□□□ 0.15
CMC4P56277 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.99■□□□□ 0.15
CMC4P56277 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CMC4P56277 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CMC4P56277 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.99■□□□□ 0.15
CMC4P56277 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CMC4P56277 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms