Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC055733.4-201ENST00000638462 1354 ntBASIC20.8■□□□□ 0.92
EPHA4P54764 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA4P54764 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EPHA4P54764 AP004607.7-201ENST00000527152 1677 ntBASIC20.8■□□□□ 0.92
EPHA4P54764 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.8■□□□□ 0.92
EPHA4P54764 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.79■□□□□ 0.92
EPHA4P54764 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
EPHA4P54764 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.79■□□□□ 0.92
EPHA4P54764 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
EPHA4P54764 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.79■□□□□ 0.92
EPHA4P54764 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.79■□□□□ 0.92
EPHA4P54764 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.79■□□□□ 0.92
EPHA4P54764 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
EPHA4P54764 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.79■□□□□ 0.92
EPHA4P54764 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EPHA4P54764 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA4P54764 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHA4P54764 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
EPHA4P54764 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 LINC00526-201ENST00000581067 1875 ntBASIC20.78■□□□□ 0.92
EPHA4P54764 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.78■□□□□ 0.92
EPHA4P54764 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.78■□□□□ 0.92
EPHA4P54764 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.78■□□□□ 0.92
EPHA4P54764 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.78■□□□□ 0.92
EPHA4P54764 AC080038.1-201ENST00000611274 1154 ntBASIC20.78■□□□□ 0.92
EPHA4P54764 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA4P54764 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHA4P54764 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.77■□□□□ 0.92
EPHA4P54764 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EPHA4P54764 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.77■□□□□ 0.92
EPHA4P54764 BID-214ENST00000617586 542 ntTSL 5 BASIC20.77■□□□□ 0.92
EPHA4P54764 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.77■□□□□ 0.92
EPHA4P54764 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA4P54764 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.77■□□□□ 0.92
EPHA4P54764 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.77■□□□□ 0.91
EPHA4P54764 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.77■□□□□ 0.91
EPHA4P54764 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EPHA4P54764 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 ESRRAP2-201ENST00000418437 1549 ntBASIC20.76■□□□□ 0.91
EPHA4P54764 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EPHA4P54764 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA4P54764 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA4P54764 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA4P54764 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA4P54764 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EPHA4P54764 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
EPHA4P54764 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.75■□□□□ 0.91
EPHA4P54764 AC104187.1-201ENST00000607510 612 ntBASIC20.75■□□□□ 0.91
EPHA4P54764 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA4P54764 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA4P54764 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHA4P54764 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHA4P54764 DUSP8P5-201ENST00000422884 1815 ntBASIC20.74■□□□□ 0.91
EPHA4P54764 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EPHA4P54764 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.74■□□□□ 0.91
EPHA4P54764 AC087742.1-201ENST00000575880 1738 ntBASIC20.74■□□□□ 0.91
EPHA4P54764 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.74■□□□□ 0.91
EPHA4P54764 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA4P54764 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.73■□□□□ 0.91
EPHA4P54764 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHA4P54764 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
EPHA4P54764 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA4P54764 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
EPHA4P54764 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHA4P54764 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHA4P54764 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms