Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP1B3P54709 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP1B3P54709 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.61■□□□□ 0.57
ATP1B3P54709 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
ATP1B3P54709 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
ATP1B3P54709 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP1B3P54709 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP1B3P54709 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP1B3P54709 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP1B3P54709 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 AC006455.2-201ENST00000429931 906 ntBASIC18.6■□□□□ 0.57
ATP1B3P54709 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP1B3P54709 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP1B3P54709 AC092171.4-201ENST00000609130 632 ntBASIC18.6■□□□□ 0.57
ATP1B3P54709 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP1B3P54709 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP1B3P54709 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP1B3P54709 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ATP1B3P54709 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP1B3P54709 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 SRD5A1P1-201ENST00000442297 786 ntBASIC18.59■□□□□ 0.57
ATP1B3P54709 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATP1B3P54709 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP1B3P54709 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP1B3P54709 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP1B3P54709 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP1B3P54709 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP1B3P54709 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP1B3P54709 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATP1B3P54709 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP1B3P54709 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP1B3P54709 AC073130.3-201ENST00000624389 2278 ntBASIC18.58■□□□□ 0.56
ATP1B3P54709 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP1B3P54709 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP1B3P54709 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP1B3P54709 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP1B3P54709 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP1B3P54709 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP1B3P54709 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP1B3P54709 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP1B3P54709 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP1B3P54709 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP1B3P54709 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATP1B3P54709 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP1B3P54709 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP1B3P54709 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP1B3P54709 AL031602.1-201ENST00000633169 911 ntBASIC18.57■□□□□ 0.56
ATP1B3P54709 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP1B3P54709 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATP1B3P54709 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP1B3P54709 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP1B3P54709 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP1B3P54709 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP1B3P54709 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ATP1B3P54709 AC068587.7-201ENST00000641602 218 ntBASIC18.56■□□□□ 0.56
ATP1B3P54709 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP1B3P54709 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP1B3P54709 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP1B3P54709 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ATP1B3P54709 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms