Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 CNS1YBR155W 1158 nt2.98□□□□□ -1.93
SSU72P53538 XRN1YGL173C 4587 nt2.98□□□□□ -1.93
SSU72P53538 GAT2YMR136W 1683 nt2.98□□□□□ -1.93
SSU72P53538 MDV1YJL112W 2145 nt2.98□□□□□ -1.93
SSU72P53538 YGR027W-BYGR027W-B 5268 nt2.98□□□□□ -1.93
SSU72P53538 YLR227W-BYLR227W-B 5268 nt2.98□□□□□ -1.93
SSU72P53538 YPR158C-DYPR158C-D 5268 nt2.98□□□□□ -1.93
SSU72P53538 NDC80YIL144W 2076 nt2.97□□□□□ -1.93
SSU72P53538 RTT109YLL002W 1311 nt2.97□□□□□ -1.93
SSU72P53538 VBA4YDR119W 2307 nt2.97□□□□□ -1.93
SSU72P53538 MSW1YDR268W 1140 nt2.97□□□□□ -1.93
SSU72P53538 NSE3YDR288W 912 nt2.97□□□□□ -1.93
SSU72P53538 RMT2YDR465C 1239 nt2.97□□□□□ -1.93
SSU72P53538 RPL1BYGL135W 654 nt2.97□□□□□ -1.93
SSU72P53538 COX18YGR062C 951 nt2.97□□□□□ -1.93
SSU72P53538 SAY1YGR263C 1275 nt2.97□□□□□ -1.93
SSU72P53538 YLR049CYLR049C 1287 nt2.97□□□□□ -1.93
SSU72P53538 FLD1YLR404W 858 nt2.97□□□□□ -1.93
SSU72P53538 RPL1AYPL220W 654 nt2.97□□□□□ -1.93
SSU72P53538 ECM8YBR076W 1065 nt2.97□□□□□ -1.93
SSU72P53538 YBR089WYBR089W 600 nt2.97□□□□□ -1.93
SSU72P53538 RRP5YMR229C 5190 nt2.97□□□□□ -1.93
SSU72P53538 YMR1YJR110W 2067 nt2.97□□□□□ -1.93
SSU72P53538 RPN1YHR027C 2982 nt2.97□□□□□ -1.93
SSU72P53538 SMC2YFR031C 3513 nt2.96□□□□□ -1.94
SSU72P53538 COP1YDL145C 3606 nt2.96□□□□□ -1.94
SSU72P53538 RPC11YDR045C 333 nt2.96□□□□□ -1.94
SSU72P53538 IRC6YFR043C 714 nt2.96□□□□□ -1.94
SSU72P53538 SDT1YGL224C 843 nt2.96□□□□□ -1.94
SSU72P53538 CDC12YHR107C 1224 nt2.96□□□□□ -1.94
SSU72P53538 TMA19YKL056C 504 nt2.96□□□□□ -1.94
SSU72P53538 IMP1YMR150C 573 nt2.96□□□□□ -1.94
SSU72P53538 YNL234WYNL234W 1281 nt2.96□□□□□ -1.94
SSU72P53538 YOL024WYOL024W 519 nt2.96□□□□□ -1.94
SSU72P53538 RAS1YOR101W 930 nt2.96□□□□□ -1.94
SSU72P53538 TAF14YPL129W 735 nt2.96□□□□□ -1.94
SSU72P53538 SHE3YBR130C 1278 nt2.96□□□□□ -1.94
SSU72P53538 YBR137WYBR137W 540 nt2.96□□□□□ -1.94
SSU72P53538 UBX5YDR330W 1503 nt2.96□□□□□ -1.94
SSU72P53538 SEC15YGL233W 2733 nt2.96□□□□□ -1.94
SSU72P53538 MSM1YGR171C 1728 nt2.96□□□□□ -1.94
SSU72P53538 ASI1YMR119W 1875 nt2.95□□□□□ -1.94
SSU72P53538 MSD1YPL104W 1977 nt2.95□□□□□ -1.94
SSU72P53538 VMA8YEL051W 771 nt2.95□□□□□ -1.94
SSU72P53538 COX19YLL018C-A 297 nt2.95□□□□□ -1.94
SSU72P53538 URA4YLR420W 1095 nt2.95□□□□□ -1.94
SSU72P53538 MET16YPR167C 786 nt2.95□□□□□ -1.94
SSU72P53538 DER1YBR201W 636 nt2.95□□□□□ -1.94
SSU72P53538 SSL1YLR005W 1386 nt2.95□□□□□ -1.94
SSU72P53538 SRO9YCL037C 1305 nt2.94□□□□□ -1.94
SSU72P53538 JEN1YKL217W 1851 nt2.94□□□□□ -1.94
SSU72P53538 DSN1YIR010W 1731 nt2.94□□□□□ -1.94
SSU72P53538 YPR022CYPR022C 3402 nt2.94□□□□□ -1.94
SSU72P53538 YVC1YOR087W 2028 nt2.94□□□□□ -1.94
SSU72P53538 GRX6YDL010W 696 nt2.94□□□□□ -1.94
SSU72P53538 YDL241WYDL241W 372 nt2.94□□□□□ -1.94
SSU72P53538 BMH2YDR099W 822 nt2.94□□□□□ -1.94
SSU72P53538 RMD5YDR255C 1266 nt2.94□□□□□ -1.94
SSU72P53538 IES6YEL044W 501 nt2.94□□□□□ -1.94
SSU72P53538 YGR204C-AYGR204C-A 114 nt2.94□□□□□ -1.94
SSU72P53538 YHL045WYHL045W 348 nt2.94□□□□□ -1.94
SSU72P53538 YJL028WYJL028W 336 nt2.94□□□□□ -1.94
SSU72P53538 YPR108W-AYPR108W-A 213 nt2.94□□□□□ -1.94
SSU72P53538 AEP2YMR282C 1743 nt2.93□□□□□ -1.94
SSU72P53538 TAF1YGR274C 3201 nt2.93□□□□□ -1.94
SSU72P53538 FLO1YAR050W 4614 nt2.93□□□□□ -1.94
SSU72P53538 GYP6YJL044C 1377 nt2.93□□□□□ -1.94
SSU72P53538 BLS1YLR408C 369 nt2.93□□□□□ -1.94
SSU72P53538 RLP7YNL002C 969 nt2.93□□□□□ -1.94
SSU72P53538 YOR338WYOR338W 1092 nt2.93□□□□□ -1.94
SSU72P53538 YBR242WYBR242W 717 nt2.93□□□□□ -1.94
SSU72P53538 TAO3YIL129C 7131 nt2.93□□□□□ -1.94
SSU72P53538 UBP5YER144C 2418 nt2.93□□□□□ -1.94
SSU72P53538 SNQ2YDR011W 4506 nt2.93□□□□□ -1.94
SSU72P53538 SPT10YJL127C 1923 nt2.93□□□□□ -1.94
SSU72P53538 YGR237CYGR237C 2358 nt2.93□□□□□ -1.94
SSU72P53538 RPN6YDL097C 1305 nt2.93□□□□□ -1.94
SSU72P53538 MTH1YDR277C 1302 nt2.93□□□□□ -1.94
SSU72P53538 KRE2YDR483W 1329 nt2.93□□□□□ -1.94
SSU72P53538 RPS29BYDL061C 171 nt2.92□□□□□ -1.94
SSU72P53538 FAP7YDL166C 594 nt2.92□□□□□ -1.94
SSU72P53538 ENT5YDR153C 1236 nt2.92□□□□□ -1.94
SSU72P53538 YPR1YDR368W 939 nt2.92□□□□□ -1.94
SSU72P53538 RPS0AYGR214W 759 nt2.92□□□□□ -1.94
SSU72P53538 IME1YJR094C 1083 nt2.92□□□□□ -1.94
SSU72P53538 YKL177WYKL177W 339 nt2.92□□□□□ -1.94
SSU72P53538 YLR416CYLR416C 399 nt2.92□□□□□ -1.94
SSU72P53538 RIM11YMR139W 1113 nt2.92□□□□□ -1.94
SSU72P53538 MCK1YNL307C 1128 nt2.92□□□□□ -1.94
SSU72P53538 AIM39YOL053W 1188 nt2.92□□□□□ -1.94
SSU72P53538 MED7YOL135C 669 nt2.92□□□□□ -1.94
SSU72P53538 CYC2YOR037W 1101 nt2.92□□□□□ -1.94
SSU72P53538 MCM16YPR046W 546 nt2.92□□□□□ -1.94
SSU72P53538 RRN6YBL014C 2685 nt2.92□□□□□ -1.94
SSU72P53538 HMS1YOR032C 1305 nt2.92□□□□□ -1.94
SSU72P53538 LTV1YKL143W 1392 nt2.91□□□□□ -1.94
SSU72P53538 PUF6YDR496C 1971 nt2.91□□□□□ -1.94
SSU72P53538 RRP17YDR412W 708 nt2.91□□□□□ -1.94
SSU72P53538 CNN1YFR046C 1086 nt2.91□□□□□ -1.94
SSU72P53538 YGR219WYGR219W 342 nt2.91□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms