Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL117332.1-201ENST00000622628 974 ntBASIC19.7■□□□□ 0.74
HMGA2P52926 AC068587.7-201ENST00000641602 218 ntBASIC19.7■□□□□ 0.74
HMGA2P52926 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGA2P52926 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGA2P52926 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGA2P52926 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HMGA2P52926 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGA2P52926 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HMGA2P52926 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGA2P52926 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGA2P52926 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGA2P52926 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HMGA2P52926 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGA2P52926 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGA2P52926 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGA2P52926 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGA2P52926 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGA2P52926 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGA2P52926 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGA2P52926 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGA2P52926 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGA2P52926 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGA2P52926 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGA2P52926 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGA2P52926 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGA2P52926 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
HMGA2P52926 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGA2P52926 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGA2P52926 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGA2P52926 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGA2P52926 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGA2P52926 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGA2P52926 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMGA2P52926 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGA2P52926 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGA2P52926 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGA2P52926 AC239859.2-201ENST00000444165 318 ntBASIC19.65■□□□□ 0.74
HMGA2P52926 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGA2P52926 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGA2P52926 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGA2P52926 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGA2P52926 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGA2P52926 LINC01521-201ENST00000504184 1943 ntBASIC19.64■□□□□ 0.74
HMGA2P52926 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGA2P52926 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGA2P52926 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGA2P52926 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGA2P52926 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMGA2P52926 MIR6724-1-201ENST00000616420 92 ntBASIC19.64■□□□□ 0.73
HMGA2P52926 MIR6724-2-201ENST00000616483 92 ntBASIC19.64■□□□□ 0.73
HMGA2P52926 MIR6724-4-201ENST00000617390 92 ntBASIC19.64■□□□□ 0.73
HMGA2P52926 MIR6724-3-201ENST00000622482 92 ntBASIC19.64■□□□□ 0.73
HMGA2P52926 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
HMGA2P52926 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HMGA2P52926 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGA2P52926 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGA2P52926 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGA2P52926 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGA2P52926 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGA2P52926 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGA2P52926 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGA2P52926 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 OXCT2P1-201ENST00000447263 1535 ntBASIC19.63■□□□□ 0.73
HMGA2P52926 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGA2P52926 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGA2P52926 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HMGA2P52926 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.63■□□□□ 0.73
HMGA2P52926 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HMGA2P52926 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HMGA2P52926 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms