Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB28P51157 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAB28P51157 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB28P51157 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB28P51157 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB28P51157 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.83■□□□□ 0.93
RAB28P51157 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.83■□□□□ 0.93
RAB28P51157 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB28P51157 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB28P51157 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RAB28P51157 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB28P51157 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB28P51157 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB28P51157 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB28P51157 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.82■□□□□ 0.92
RAB28P51157 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB28P51157 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB28P51157 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAB28P51157 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB28P51157 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB28P51157 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAB28P51157 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB28P51157 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAB28P51157 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 AC092053.2-201ENST00000640557 1818 ntBASIC20.81■□□□□ 0.92
RAB28P51157 AC005224.4-201ENST00000583262 1652 ntBASIC20.81■□□□□ 0.92
RAB28P51157 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAB28P51157 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB28P51157 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB28P51157 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB28P51157 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB28P51157 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.81■□□□□ 0.92
RAB28P51157 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB28P51157 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RAB28P51157 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
RAB28P51157 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB28P51157 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB28P51157 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB28P51157 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB28P51157 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB28P51157 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB28P51157 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAB28P51157 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAB28P51157 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAB28P51157 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB28P51157 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 ECEL1P1-201ENST00000373592 1742 ntBASIC20.8■□□□□ 0.92
RAB28P51157 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 AL117328.2-201ENST00000624617 1940 ntBASIC20.8■□□□□ 0.92
RAB28P51157 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB28P51157 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB28P51157 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB28P51157 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB28P51157 TERF1P2-201ENST00000583350 1212 ntBASIC20.79■□□□□ 0.92
RAB28P51157 AC087623.3-201ENST00000607047 1098 ntBASIC20.79■□□□□ 0.92
RAB28P51157 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB28P51157 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB28P51157 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB28P51157 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.79■□□□□ 0.92
RAB28P51157 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB28P51157 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB28P51157 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB28P51157 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB28P51157 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms