Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.43■□□□□ 0.7
CENPAP49450 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.42■□□□□ 0.7
CENPAP49450 pRNA.6-201ENST00000610482 90 ntBASIC19.42■□□□□ 0.7
CENPAP49450 pRNA.5-201ENST00000612139 90 ntBASIC19.42■□□□□ 0.7
CENPAP49450 pRNA.11-201ENST00000618423 90 ntBASIC19.42■□□□□ 0.7
CENPAP49450 pRNA.13-201ENST00000619112 90 ntBASIC19.42■□□□□ 0.7
CENPAP49450 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPAP49450 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CENPAP49450 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CENPAP49450 FBXW4P1-201ENST00000426721 2239 ntBASIC19.41■□□□□ 0.7
CENPAP49450 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPAP49450 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.41■□□□□ 0.7
CENPAP49450 AC099791.2-201ENST00000605725 427 ntBASIC19.41■□□□□ 0.7
CENPAP49450 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CENPAP49450 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPAP49450 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPAP49450 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CENPAP49450 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 AC006455.2-201ENST00000429931 906 ntBASIC19.4■□□□□ 0.7
CENPAP49450 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPAP49450 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CENPAP49450 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CENPAP49450 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPAP49450 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CENPAP49450 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPAP49450 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPAP49450 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CENPAP49450 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPAP49450 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPAP49450 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPAP49450 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CENPAP49450 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPAP49450 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CENPAP49450 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CENPAP49450 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.39■□□□□ 0.69
CENPAP49450 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPAP49450 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPAP49450 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPAP49450 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPAP49450 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPAP49450 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPAP49450 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CENPAP49450 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CENPAP49450 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPAP49450 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPAP49450 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.38■□□□□ 0.69
CENPAP49450 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CENPAP49450 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPAP49450 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPAP49450 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPAP49450 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPAP49450 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPAP49450 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CENPAP49450 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 AC133637.1-201ENST00000624115 1537 ntBASIC19.37■□□□□ 0.69
CENPAP49450 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms