Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SLC9A3P48764 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC9A3P48764 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC9A3P48764 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC9A3P48764 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC9A3P48764 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SLC9A3P48764 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC9A3P48764 GUSBP5-201ENST00000418136 578 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC9A3P48764 MIR3621-201ENST00000580529 85 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 pRNA.6-201ENST00000610482 90 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 pRNA.5-201ENST00000612139 90 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 pRNA.11-201ENST00000618423 90 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 pRNA.13-201ENST00000619112 90 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 AL031602.1-201ENST00000633169 911 ntBASIC19.65■□□□□ 0.74
SLC9A3P48764 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC9A3P48764 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC9A3P48764 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC9A3P48764 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC9A3P48764 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC9A3P48764 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC9A3P48764 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SLC9A3P48764 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC9A3P48764 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC9A3P48764 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC9A3P48764 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC9A3P48764 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC9A3P48764 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC9A3P48764 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC9A3P48764 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC9A3P48764 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC9A3P48764 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC9A3P48764 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC9A3P48764 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC9A3P48764 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC9A3P48764 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SLC9A3P48764 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC9A3P48764 AC006455.2-201ENST00000429931 906 ntBASIC19.62■□□□□ 0.73
SLC9A3P48764 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC9A3P48764 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC9A3P48764 AC099791.2-201ENST00000605725 427 ntBASIC19.62■□□□□ 0.73
SLC9A3P48764 AC092171.4-201ENST00000609130 632 ntBASIC19.62■□□□□ 0.73
SLC9A3P48764 AC068587.7-201ENST00000641602 218 ntBASIC19.62■□□□□ 0.73
SLC9A3P48764 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC9A3P48764 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC9A3P48764 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC9A3P48764 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC9A3P48764 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC9A3P48764 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC9A3P48764 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC9A3P48764 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC9A3P48764 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC9A3P48764 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC9A3P48764 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SLC9A3P48764 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.6■□□□□ 0.73
SLC9A3P48764 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC9A3P48764 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC9A3P48764 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC9A3P48764 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms