Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A11P48066 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A11P48066 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22■■□□□ 1.11
SLC6A11P48066 AL109923.1-201ENST00000618799 583 ntBASIC22■■□□□ 1.11
SLC6A11P48066 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A11P48066 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A11P48066 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A11P48066 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A11P48066 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC6A11P48066 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A11P48066 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC6A11P48066 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC6A11P48066 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SLC6A11P48066 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC6A11P48066 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC6A11P48066 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A11P48066 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SLC6A11P48066 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.98■■□□□ 1.11
SLC6A11P48066 DUX4L16-201ENST00000555130 1264 ntBASIC21.98■■□□□ 1.11
SLC6A11P48066 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.98■■□□□ 1.11
SLC6A11P48066 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A11P48066 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A11P48066 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A11P48066 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A11P48066 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A11P48066 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC6A11P48066 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SLC6A11P48066 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.97■■□□□ 1.11
SLC6A11P48066 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.97■■□□□ 1.11
SLC6A11P48066 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC6A11P48066 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
SLC6A11P48066 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A11P48066 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SLC6A11P48066 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 AL355802.2-201ENST00000402069 882 ntBASIC21.96■■□□□ 1.11
SLC6A11P48066 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.96■■□□□ 1.11
SLC6A11P48066 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SLC6A11P48066 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SLC6A11P48066 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A11P48066 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC6A11P48066 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A11P48066 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SLC6A11P48066 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A11P48066 AL050303.2-201ENST00000619798 666 ntBASIC21.95■■□□□ 1.1
SLC6A11P48066 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SLC6A11P48066 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A11P48066 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A11P48066 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A11P48066 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SLC6A11P48066 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC6A11P48066 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A11P48066 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A11P48066 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A11P48066 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC6A11P48066 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A11P48066 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.94■■□□□ 1.1
SLC6A11P48066 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC6A11P48066 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A11P48066 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC6A11P48066 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A11P48066 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 GPX1P1-201ENST00000388829 606 ntBASIC21.93■■□□□ 1.1
SLC6A11P48066 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A11P48066 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.93■■□□□ 1.1
SLC6A11P48066 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A11P48066 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC6A11P48066 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.93■■□□□ 1.1
SLC6A11P48066 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC6A11P48066 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A11P48066 MYCNOS-205ENST00000641950 531 ntBASIC21.93■■□□□ 1.1
SLC6A11P48066 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC6A11P48066 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC6A11P48066 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A11P48066 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC6A11P48066 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms