Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PIR1YKL164C 1026 nt2.77□□□□□ -1.97
CUP9P41817 OCA2YNL056W 594 nt2.77□□□□□ -1.97
CUP9P41817 RPS7AYOR096W 573 nt2.77□□□□□ -1.97
CUP9P41817 ANT1YPR128C 987 nt2.77□□□□□ -1.97
CUP9P41817 BUD4YJR092W 4344 nt2.76□□□□□ -1.97
CUP9P41817 FAA2YER015W 2235 nt2.76□□□□□ -1.97
CUP9P41817 YDR250CYDR250C 276 nt2.76□□□□□ -1.97
CUP9P41817 tQ(UUG)BtQ(UUG)B 72 nt2.76□□□□□ -1.97
CUP9P41817 DOG2YHR043C 741 nt2.76□□□□□ -1.97
CUP9P41817 THP2YHR167W 786 nt2.76□□□□□ -1.97
CUP9P41817 POG1YIL122W 1056 nt2.76□□□□□ -1.97
CUP9P41817 IRC18YJL037W 675 nt2.76□□□□□ -1.97
CUP9P41817 YKL033W-AYKL033W-A 711 nt2.76□□□□□ -1.97
CUP9P41817 COX14YML129C 213 nt2.76□□□□□ -1.97
CUP9P41817 TRI1YMR233W 681 nt2.76□□□□□ -1.97
CUP9P41817 YOL079WYOL079W 399 nt2.76□□□□□ -1.97
CUP9P41817 CMD1YBR109C 444 nt2.76□□□□□ -1.97
CUP9P41817 ARO4YBR249C 1113 nt2.76□□□□□ -1.97
CUP9P41817 YME2YMR302C 2553 nt2.76□□□□□ -1.97
CUP9P41817 UBP12YJL197W 3765 nt2.76□□□□□ -1.97
CUP9P41817 FBP26YJL155C 1359 nt2.75□□□□□ -1.97
CUP9P41817 ERG9YHR190W 1335 nt2.75□□□□□ -1.97
CUP9P41817 PCI8YIL071C 1335 nt2.75□□□□□ -1.97
CUP9P41817 SIZ1YDR409W 2715 nt2.75□□□□□ -1.97
CUP9P41817 POL2YNL262W 6669 nt2.75□□□□□ -1.97
CUP9P41817 RSE1YML049C 4086 nt2.75□□□□□ -1.97
CUP9P41817 MOB2YFL034C-B 864 nt2.75□□□□□ -1.97
CUP9P41817 USE1YGL098W 738 nt2.75□□□□□ -1.97
CUP9P41817 USB1YLR132C 873 nt2.75□□□□□ -1.97
CUP9P41817 TEM1YML064C 738 nt2.75□□□□□ -1.97
CUP9P41817 RPC34YNR003C 954 nt2.75□□□□□ -1.97
CUP9P41817 VAC8YEL013W 1737 nt2.75□□□□□ -1.97
CUP9P41817 NRP1YDL167C 2160 nt2.75□□□□□ -1.97
CUP9P41817 BUD6YLR319C 2367 nt2.75□□□□□ -1.97
CUP9P41817 RTK1YDL025C 1863 nt2.75□□□□□ -1.97
CUP9P41817 YPS6YIR039C 1614 nt2.75□□□□□ -1.97
CUP9P41817 SPB4YFL002C 1821 nt2.75□□□□□ -1.97
CUP9P41817 RNY1YPL123C 1305 nt2.74□□□□□ -1.97
CUP9P41817 CLC1YGR167W 702 nt2.74□□□□□ -1.97
CUP9P41817 DDP1YOR163W 567 nt2.74□□□□□ -1.97
CUP9P41817 YOR186WYOR186W 435 nt2.74□□□□□ -1.97
CUP9P41817 OXR1YPL196W 822 nt2.74□□□□□ -1.97
CUP9P41817 DOA4YDR069C 2781 nt2.74□□□□□ -1.97
CUP9P41817 YKL222CYKL222C 2118 nt2.74□□□□□ -1.97
CUP9P41817 TFB2YPL122C 1542 nt2.73□□□□□ -1.97
CUP9P41817 DYN1YKR054C 12279 nt2.73□□□□□ -1.97
CUP9P41817 TMA108YIL137C 2841 nt2.73□□□□□ -1.97
CUP9P41817 RPL23BYER117W 414 nt2.73□□□□□ -1.97
CUP9P41817 YGL218WYGL218W 651 nt2.73□□□□□ -1.97
CUP9P41817 PET54YGR222W 882 nt2.73□□□□□ -1.97
CUP9P41817 RIM9YMR063W 720 nt2.73□□□□□ -1.97
CUP9P41817 ERD2YBL040C 660 nt2.73□□□□□ -1.97
CUP9P41817 PRP3YDR473C 1410 nt2.73□□□□□ -1.97
CUP9P41817 ROG1YGL144C 2058 nt2.73□□□□□ -1.97
CUP9P41817 FAS1YKL182W 6156 nt2.73□□□□□ -1.97
CUP9P41817 VPS27YNR006W 1869 nt2.73□□□□□ -1.97
CUP9P41817 TCP1YDR212W 1680 nt2.73□□□□□ -1.97
CUP9P41817 SSE2YBR169C 2082 nt2.72□□□□□ -1.97
CUP9P41817 NHP10YDL002C 612 nt2.72□□□□□ -1.97
CUP9P41817 OKP1YGR179C 1221 nt2.72□□□□□ -1.97
CUP9P41817 DLS1YJL065C 504 nt2.72□□□□□ -1.97
CUP9P41817 RPL17AYKL180W 555 nt2.72□□□□□ -1.97
CUP9P41817 RPS28BYLR264W 204 nt2.72□□□□□ -1.97
CUP9P41817 YMR087WYMR087W 855 nt2.72□□□□□ -1.97
CUP9P41817 RHO5YNL180C 996 nt2.72□□□□□ -1.97
CUP9P41817 TMC1YOR052C 453 nt2.72□□□□□ -1.97
CUP9P41817 SHE3YBR130C 1278 nt2.72□□□□□ -1.97
CUP9P41817 YOR296WYOR296W 3870 nt2.72□□□□□ -1.97
CUP9P41817 ISW2YOR304W 3363 nt2.72□□□□□ -1.97
CUP9P41817 MDM38YOL027C 1722 nt2.71□□□□□ -1.98
CUP9P41817 DET1YDR051C 1005 nt2.71□□□□□ -1.98
CUP9P41817 DOS2YDR068W 933 nt2.71□□□□□ -1.98
CUP9P41817 HAT2YEL056W 1206 nt2.71□□□□□ -1.98
CUP9P41817 HMF1YER057C 390 nt2.71□□□□□ -1.98
CUP9P41817 FMC1YIL098C 468 nt2.71□□□□□ -1.98
CUP9P41817 CPR3YML078W 549 nt2.71□□□□□ -1.98
CUP9P41817 SSO2YMR183C 888 nt2.71□□□□□ -1.98
CUP9P41817 VAM10YOR068C 345 nt2.71□□□□□ -1.98
CUP9P41817 TAO3YIL129C 7131 nt2.71□□□□□ -1.98
CUP9P41817 TLC1TLC1 1301 nt2.7□□□□□ -1.98
CUP9P41817 CLD1YGR110W 1338 nt2.7□□□□□ -1.98
CUP9P41817 NEM1YHR004C 1341 nt2.7□□□□□ -1.98
CUP9P41817 FRE4YNR060W 2160 nt2.7□□□□□ -1.98
CUP9P41817 CAF130YGR134W 3369 nt2.7□□□□□ -1.98
CUP9P41817 RPC37YKR025W 849 nt2.7□□□□□ -1.98
CUP9P41817 NIT3YLR351C 876 nt2.7□□□□□ -1.98
CUP9P41817 SIL1YOL031C 1266 nt2.7□□□□□ -1.98
CUP9P41817 MUP3YHL036W 1641 nt2.7□□□□□ -1.98
CUP9P41817 ALG1YBR110W 1350 nt2.7□□□□□ -1.98
CUP9P41817 SET1YHR119W 3243 nt2.7□□□□□ -1.98
CUP9P41817 SLM2YNL047C 1971 nt2.69□□□□□ -1.98
CUP9P41817 YIL047C-AYIL047C-A 369 nt2.69□□□□□ -1.98
CUP9P41817 TTI2YJR136C 1266 nt2.69□□□□□ -1.98
CUP9P41817 TIS11YLR136C 858 nt2.69□□□□□ -1.98
CUP9P41817 YMR294W-AYMR294W-A 360 nt2.69□□□□□ -1.98
CUP9P41817 YOR331CYOR331C 558 nt2.69□□□□□ -1.98
CUP9P41817 YPR077CYPR077C 372 nt2.69□□□□□ -1.98
CUP9P41817 ROM1YGR070W 3468 nt2.69□□□□□ -1.98
CUP9P41817 PGS1YCL004W 1566 nt2.69□□□□□ -1.98
CUP9P41817 YPL109CYPL109C 1974 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms