Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC3P40938 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.7■□□□□ 0.74
RFC3P40938 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC3P40938 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.7■□□□□ 0.74
RFC3P40938 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC3P40938 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 AC137761.2-201ENST00000561729 223 ntBASIC19.7■□□□□ 0.74
RFC3P40938 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.7■□□□□ 0.74
RFC3P40938 AC145350.3-201ENST00000569033 163 ntBASIC19.7■□□□□ 0.74
RFC3P40938 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC3P40938 AP004607.4-201ENST00000530158 1459 ntBASIC19.7■□□□□ 0.74
RFC3P40938 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFC3P40938 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC3P40938 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.69■□□□□ 0.74
RFC3P40938 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.69■□□□□ 0.74
RFC3P40938 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC3P40938 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC3P40938 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RFC3P40938 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
RFC3P40938 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RFC3P40938 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC3P40938 AC016769.1-201ENST00000409132 1010 ntBASIC19.68■□□□□ 0.74
RFC3P40938 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC3P40938 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 AC079140.4-201ENST00000507448 529 ntBASIC19.68■□□□□ 0.74
RFC3P40938 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC3P40938 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.68■□□□□ 0.74
RFC3P40938 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC3P40938 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
RFC3P40938 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC3P40938 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC3P40938 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC3P40938 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.67■□□□□ 0.74
RFC3P40938 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.67■□□□□ 0.74
RFC3P40938 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC3P40938 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC3P40938 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFC3P40938 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFC3P40938 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.66■□□□□ 0.74
RFC3P40938 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.66■□□□□ 0.74
RFC3P40938 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC3P40938 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RFC3P40938 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
RFC3P40938 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RFC3P40938 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.65■□□□□ 0.74
RFC3P40938 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.65■□□□□ 0.74
RFC3P40938 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.65■□□□□ 0.74
RFC3P40938 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC3P40938 DUSP8P5-201ENST00000422884 1815 ntBASIC19.65■□□□□ 0.74
RFC3P40938 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFC3P40938 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.64■□□□□ 0.74
RFC3P40938 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC3P40938 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC3P40938 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.64■□□□□ 0.73
RFC3P40938 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.64■□□□□ 0.73
RFC3P40938 AC079089.2-201ENST00000531211 1277 ntBASIC19.64■□□□□ 0.73
RFC3P40938 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.64■□□□□ 0.73
RFC3P40938 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.64■□□□□ 0.73
RFC3P40938 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.64■□□□□ 0.73
RFC3P40938 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC3P40938 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC3P40938 AC005224.4-201ENST00000583262 1652 ntBASIC19.64■□□□□ 0.73
RFC3P40938 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RFC3P40938 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC3P40938 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFC3P40938 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms