Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCKBRP32239 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.69■□□□□ 0.9
CCKBRP32239 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCKBRP32239 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCKBRP32239 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCKBRP32239 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.69■□□□□ 0.9
CCKBRP32239 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.69■□□□□ 0.9
CCKBRP32239 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.69■□□□□ 0.9
CCKBRP32239 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
CCKBRP32239 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCKBRP32239 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCKBRP32239 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCKBRP32239 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCKBRP32239 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCKBRP32239 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCKBRP32239 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCKBRP32239 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCKBRP32239 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
CCKBRP32239 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.68■□□□□ 0.9
CCKBRP32239 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CCKBRP32239 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
CCKBRP32239 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.68■□□□□ 0.9
CCKBRP32239 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCKBRP32239 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCKBRP32239 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCKBRP32239 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.67■□□□□ 0.9
CCKBRP32239 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCKBRP32239 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.67■□□□□ 0.9
CCKBRP32239 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.67■□□□□ 0.9
CCKBRP32239 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.67■□□□□ 0.9
CCKBRP32239 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCKBRP32239 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCKBRP32239 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.66■□□□□ 0.9
CCKBRP32239 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.66■□□□□ 0.9
CCKBRP32239 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.66■□□□□ 0.9
CCKBRP32239 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.66■□□□□ 0.9
CCKBRP32239 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 DUX4L16-201ENST00000555130 1264 ntBASIC20.66■□□□□ 0.9
CCKBRP32239 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.66■□□□□ 0.9
CCKBRP32239 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.66■□□□□ 0.9
CCKBRP32239 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 AL121832.2-201ENST00000610979 668 ntBASIC20.66■□□□□ 0.9
CCKBRP32239 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.66■□□□□ 0.9
CCKBRP32239 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCKBRP32239 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.66■□□□□ 0.9
CCKBRP32239 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCKBRP32239 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCKBRP32239 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCKBRP32239 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.65■□□□□ 0.9
CCKBRP32239 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CCKBRP32239 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.65■□□□□ 0.9
CCKBRP32239 AC055733.4-201ENST00000638462 1354 ntBASIC20.65■□□□□ 0.9
CCKBRP32239 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.65■□□□□ 0.9
CCKBRP32239 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCKBRP32239 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.65■□□□□ 0.9
CCKBRP32239 AC142086.2-201ENST00000569753 217 ntBASIC20.65■□□□□ 0.9
CCKBRP32239 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.65■□□□□ 0.9
CCKBRP32239 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCKBRP32239 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
CCKBRP32239 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.65■□□□□ 0.9
CCKBRP32239 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCKBRP32239 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCKBRP32239 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
CCKBRP32239 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCKBRP32239 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCKBRP32239 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CCKBRP32239 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCKBRP32239 ABHD17AP1-201ENST00000358206 933 ntBASIC20.64■□□□□ 0.89
CCKBRP32239 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCKBRP32239 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.64■□□□□ 0.89
CCKBRP32239 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
CCKBRP32239 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.64■□□□□ 0.89
CCKBRP32239 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.64■□□□□ 0.89
CCKBRP32239 AP001160.3-201ENST00000601484 763 ntBASIC20.64■□□□□ 0.89
CCKBRP32239 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.64■□□□□ 0.89
CCKBRP32239 AL050303.2-201ENST00000619798 666 ntBASIC20.64■□□□□ 0.89
CCKBRP32239 MYCNOS-205ENST00000641950 531 ntBASIC20.64■□□□□ 0.89
CCKBRP32239 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCKBRP32239 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms