Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD40P25942 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CD40P25942 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 AC016769.1-201ENST00000409132 1010 ntBASIC18.59■□□□□ 0.57
CD40P25942 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.59■□□□□ 0.57
CD40P25942 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.59■□□□□ 0.57
CD40P25942 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD40P25942 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CD40P25942 KRT87P-202ENST00000534226 1464 ntBASIC18.58■□□□□ 0.57
CD40P25942 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.57
CD40P25942 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CD40P25942 AC055733.4-201ENST00000638462 1354 ntBASIC18.58■□□□□ 0.57
CD40P25942 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD40P25942 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CD40P25942 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.58■□□□□ 0.57
CD40P25942 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD40P25942 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.58■□□□□ 0.56
CD40P25942 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.58■□□□□ 0.56
CD40P25942 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.58■□□□□ 0.56
CD40P25942 RARRES2P11-201ENST00000635158 484 ntBASIC18.58■□□□□ 0.56
CD40P25942 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD40P25942 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
CD40P25942 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.58■□□□□ 0.56
CD40P25942 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD40P25942 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD40P25942 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD40P25942 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.58■□□□□ 0.56
CD40P25942 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
CD40P25942 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.57■□□□□ 0.56
CD40P25942 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CD40P25942 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.57■□□□□ 0.56
CD40P25942 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.57■□□□□ 0.56
CD40P25942 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.57■□□□□ 0.56
CD40P25942 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.57■□□□□ 0.56
CD40P25942 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.57■□□□□ 0.56
CD40P25942 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD40P25942 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD40P25942 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CD40P25942 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
CD40P25942 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD40P25942 AC006015.1-201ENST00000429970 570 ntBASIC18.56■□□□□ 0.56
CD40P25942 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.56■□□□□ 0.56
CD40P25942 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.56■□□□□ 0.56
CD40P25942 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD40P25942 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD40P25942 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CD40P25942 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD40P25942 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.56■□□□□ 0.56
CD40P25942 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD40P25942 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 AC139530.1-201ENST00000575312 1977 ntBASIC18.55■□□□□ 0.56
CD40P25942 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CD40P25942 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.55■□□□□ 0.56
CD40P25942 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.55■□□□□ 0.56
CD40P25942 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.55■□□□□ 0.56
CD40P25942 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.55■□□□□ 0.56
CD40P25942 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CD40P25942 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD40P25942 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD40P25942 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD40P25942 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD40P25942 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD40P25942 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD40P25942 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms