Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATF4P18848 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.87■□□□□ 0.45
ATF4P18848 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.87■□□□□ 0.45
ATF4P18848 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ATF4P18848 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.87■□□□□ 0.45
ATF4P18848 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ATF4P18848 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ATF4P18848 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
ATF4P18848 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ATF4P18848 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ATF4P18848 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
ATF4P18848 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATF4P18848 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ATF4P18848 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.86■□□□□ 0.45
ATF4P18848 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATF4P18848 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.86■□□□□ 0.45
ATF4P18848 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.86■□□□□ 0.45
ATF4P18848 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATF4P18848 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.86■□□□□ 0.45
ATF4P18848 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ATF4P18848 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.86■□□□□ 0.45
ATF4P18848 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATF4P18848 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ATF4P18848 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATF4P18848 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATF4P18848 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
ATF4P18848 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 KRT18P60-201ENST00000312876 1297 ntBASIC17.85■□□□□ 0.45
ATF4P18848 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.85■□□□□ 0.45
ATF4P18848 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.85■□□□□ 0.45
ATF4P18848 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 RAP2CP1-202ENST00000605179 643 ntBASIC17.85■□□□□ 0.45
ATF4P18848 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.85■□□□□ 0.45
ATF4P18848 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATF4P18848 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.84■□□□□ 0.45
ATF4P18848 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF4P18848 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.84■□□□□ 0.45
ATF4P18848 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATF4P18848 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATF4P18848 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATF4P18848 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATF4P18848 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ATF4P18848 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
ATF4P18848 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ATF4P18848 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ATF4P18848 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATF4P18848 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
ATF4P18848 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATF4P18848 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
ATF4P18848 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATF4P18848 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATF4P18848 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.83■□□□□ 0.45
ATF4P18848 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.83■□□□□ 0.45
ATF4P18848 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATF4P18848 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.83■□□□□ 0.45
ATF4P18848 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATF4P18848 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
ATF4P18848 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF4P18848 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.83■□□□□ 0.44
ATF4P18848 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.83■□□□□ 0.44
ATF4P18848 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.83■□□□□ 0.44
ATF4P18848 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATF4P18848 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATF4P18848 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
ATF4P18848 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.82■□□□□ 0.44
ATF4P18848 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATF4P18848 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.82■□□□□ 0.44
ATF4P18848 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATF4P18848 ATP5G2P3-201ENST00000429083 425 ntBASIC17.82■□□□□ 0.44
ATF4P18848 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.82■□□□□ 0.44
ATF4P18848 AC026202.3-201ENST00000600805 1127 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms