Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 HUR1YGL168W 333 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 ASK1YKL052C 879 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 SVS1YPL163C 783 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 SUE1YPR151C 621 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 XKS1YGR194C 1803 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 MNS1YJR131W 1650 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 KRE2YDR483W 1329 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 RTT109YLL002W 1311 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 AMD1YML035C 2433 nt4.92□□□□□ -1.62
TY1A-ER1P0CX71 ERG11YHR007C 1593 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 BNA7YDR428C 786 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)B1tL(UAA)B1 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)B2tL(UAA)B2 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)DtL(UAA)D 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 SUP51tL(UAA)J 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)KtL(UAA)K 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)LtL(UAA)L 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 tL(UAA)NtL(UAA)N 84 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 MPC3YGR243W 441 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 FMC1YIL098C 468 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 TPM2YIL138C 486 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 ACF4YJR083C 930 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 NMA1YLR328W 1206 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 ATP18YML081C-A 180 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 YMR173W-AYMR173W-A 1185 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 SWS2YNL081C 432 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 YNL235CYNL235C 432 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 SWM2YNR004W 441 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 RPS19AYOL121C 435 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 YPL185WYPL185W 396 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 MCP2YLR253W 1710 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 RTC5YOR118W 1704 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 HOM3YER052C 1584 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 TYW1YPL207W 2433 nt4.91□□□□□ -1.62
TY1A-ER1P0CX71 ECM32YER176W 3366 nt4.9□□□□□ -1.62
TY1A-ER1P0CX71 SEC4YFL005W 648 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 CDC43YGL155W 1131 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 PRE9YGR135W 777 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 RPL8AYHL033C 771 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 YNK1YKL067W 462 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 CDC42YLR229C 576 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 YLR287CYLR287C 1068 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 YMR153C-AYMR153C-A 336 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 YOR186WYOR186W 435 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 MRPL40YPL173W 894 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 HPA2YPR193C 471 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 IMD2YHR216W 1572 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 BOI2YER114C 3123 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 NEL1YHR035W 1893 nt4.9□□□□□ -1.63
TY1A-ER1P0CX71 GRS1YBR121C 2004 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 PAL1YDR348C 1500 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 UBP16YPL072W 1500 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 YPD1YDL235C 504 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 PRM8YGL053W 714 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 SPO13YHR014W 876 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 YJR012CYJR012C 624 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 IES3YLR052W 753 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 YLR101CYLR101C 396 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 STM1YLR150W 822 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 YLR358CYLR358C 564 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 GLO1YML004C 981 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 RRN9YMR270C 1098 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 PBI2YNL015W 228 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 CAT5YOR125C 702 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 snR24snR24 89 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 ADE3YGR204W 2841 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 PIF1YML061C 2580 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 DAS1YJL149W 1992 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 MAG2YLR427W 2013 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 PWP1YLR196W 1731 nt4.89□□□□□ -1.63
TY1A-ER1P0CX71 BRF1YGR246C 1791 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 SNU56YDR240C 1479 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 AZR1YGR224W 1842 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 ALE1YOR175C 1860 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 CYK3YDL117W 2658 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 RPC11YDR045C 333 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 ECL1YGR146C 636 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 YGR190CYGR190C 366 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 RTT102YGR275W 474 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 TRR2YHR106W 1029 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 SDL1YIL167W 633 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 YKT6YKL196C 603 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 VPS51YKR020W 495 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 YLR224WYLR224W 1110 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 YNR034W-AYNR034W-A 297 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 NGL1YOL042W 1092 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 ETR1YBR026C 1143 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 RPS11BYBR048W 471 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 TRE1YPL176C 2352 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 ZUO1YGR285C 1302 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 RTT106YNL206C 1368 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 DSL1YNL258C 2265 nt4.88□□□□□ -1.63
TY1A-ER1P0CX71 KCC4YCL024W 3114 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 SEC27YGL137W 2670 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 RFT1YBL020W 1725 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 ATG31YDR022C 591 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 TFB3YDR460W 966 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 HLR1YDR528W 1272 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 YGR176WYGR176W 348 nt4.87□□□□□ -1.63
TY1A-ER1P0CX71 YGR228WYGR228W 345 nt4.87□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms