Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.61■□□□□ 0.73
FREM3P0C091 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
FREM3P0C091 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 AC005224.4-201ENST00000583262 1652 ntBASIC19.61■□□□□ 0.73
FREM3P0C091 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FREM3P0C091 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
FREM3P0C091 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.61■□□□□ 0.73
FREM3P0C091 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.61■□□□□ 0.73
FREM3P0C091 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FREM3P0C091 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.6■□□□□ 0.73
FREM3P0C091 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.6■□□□□ 0.73
FREM3P0C091 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.6■□□□□ 0.73
FREM3P0C091 AC022517.1-201ENST00000592429 346 ntBASIC19.6■□□□□ 0.73
FREM3P0C091 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.6■□□□□ 0.73
FREM3P0C091 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.6■□□□□ 0.73
FREM3P0C091 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.6■□□□□ 0.73
FREM3P0C091 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
FREM3P0C091 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FREM3P0C091 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.6■□□□□ 0.73
FREM3P0C091 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.6■□□□□ 0.73
FREM3P0C091 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FREM3P0C091 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FREM3P0C091 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FREM3P0C091 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
FREM3P0C091 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.59■□□□□ 0.73
FREM3P0C091 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FREM3P0C091 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FREM3P0C091 AC127496.7-201ENST00000625110 1798 ntBASIC19.59■□□□□ 0.73
FREM3P0C091 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.59■□□□□ 0.73
FREM3P0C091 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FREM3P0C091 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
FREM3P0C091 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.73
FREM3P0C091 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.58■□□□□ 0.73
FREM3P0C091 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.58■□□□□ 0.73
FREM3P0C091 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.58■□□□□ 0.73
FREM3P0C091 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FREM3P0C091 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.58■□□□□ 0.72
FREM3P0C091 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FREM3P0C091 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
FREM3P0C091 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.58■□□□□ 0.72
FREM3P0C091 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.58■□□□□ 0.72
FREM3P0C091 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
FREM3P0C091 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
FREM3P0C091 AP004607.7-201ENST00000527152 1677 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
FREM3P0C091 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 AC139530.1-201ENST00000575312 1977 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
FREM3P0C091 KRT18P61-201ENST00000585825 1298 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 AC092666.2-201ENST00000613287 246 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 AC092437.1-201ENST00000624794 1048 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 LINC00565-201ENST00000562710 2331 ntBASIC19.57■□□□□ 0.72
FREM3P0C091 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
FREM3P0C091 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
FREM3P0C091 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
FREM3P0C091 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
FREM3P0C091 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
FREM3P0C091 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.57■□□□□ 0.72
FREM3P0C091 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.57■□□□□ 0.72
FREM3P0C091 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FREM3P0C091 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
FREM3P0C091 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.56■□□□□ 0.72
FREM3P0C091 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FREM3P0C091 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.56■□□□□ 0.72
FREM3P0C091 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FREM3P0C091 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FREM3P0C091 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms