Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
THBS1P07996 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS1P07996 AC133561.4-201ENST00000566112 224 ntBASIC19.84■□□□□ 0.77
THBS1P07996 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS1P07996 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS1P07996 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS1P07996 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
THBS1P07996 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
THBS1P07996 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
THBS1P07996 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.83■□□□□ 0.77
THBS1P07996 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.83■□□□□ 0.77
THBS1P07996 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.83■□□□□ 0.77
THBS1P07996 AL034346.1-201ENST00000568244 1277 ntBASIC19.83■□□□□ 0.77
THBS1P07996 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
THBS1P07996 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
THBS1P07996 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
THBS1P07996 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
THBS1P07996 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
THBS1P07996 AC007375.3-201ENST00000600936 2314 ntBASIC19.82■□□□□ 0.76
THBS1P07996 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.82■□□□□ 0.76
THBS1P07996 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
THBS1P07996 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
THBS1P07996 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.82■□□□□ 0.76
THBS1P07996 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.82■□□□□ 0.76
THBS1P07996 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.82■□□□□ 0.76
THBS1P07996 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.82■□□□□ 0.76
THBS1P07996 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.82■□□□□ 0.76
THBS1P07996 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS1P07996 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
THBS1P07996 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS1P07996 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS1P07996 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS1P07996 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.81■□□□□ 0.76
THBS1P07996 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS1P07996 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
THBS1P07996 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.81■□□□□ 0.76
THBS1P07996 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.81■□□□□ 0.76
THBS1P07996 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.8■□□□□ 0.76
THBS1P07996 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS1P07996 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS1P07996 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.8■□□□□ 0.76
THBS1P07996 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
THBS1P07996 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS1P07996 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.8■□□□□ 0.76
THBS1P07996 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
THBS1P07996 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
THBS1P07996 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.8■□□□□ 0.76
THBS1P07996 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.8■□□□□ 0.76
THBS1P07996 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.8■□□□□ 0.76
THBS1P07996 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
THBS1P07996 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
THBS1P07996 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.79■□□□□ 0.76
THBS1P07996 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
THBS1P07996 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
THBS1P07996 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.78■□□□□ 0.76
THBS1P07996 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
THBS1P07996 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.78■□□□□ 0.76
THBS1P07996 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
THBS1P07996 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
THBS1P07996 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 BX842568.3-201ENST00000418104 571 ntBASIC19.78■□□□□ 0.76
THBS1P07996 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
THBS1P07996 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms