Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CD74P04233 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD74P04233 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.1■□□□□ 0.49
CD74P04233 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CD74P04233 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CD74P04233 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.1■□□□□ 0.49
CD74P04233 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.1■□□□□ 0.49
CD74P04233 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD74P04233 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD74P04233 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CD74P04233 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
CD74P04233 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CD74P04233 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 AC026471.6-201ENST00000622954 1905 ntBASIC18.09■□□□□ 0.49
CD74P04233 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
CD74P04233 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD74P04233 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD74P04233 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.09■□□□□ 0.49
CD74P04233 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD74P04233 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD74P04233 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD74P04233 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
CD74P04233 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CD74P04233 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.08■□□□□ 0.48
CD74P04233 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.08■□□□□ 0.48
CD74P04233 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CD74P04233 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.08■□□□□ 0.48
CD74P04233 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.08■□□□□ 0.48
CD74P04233 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.08■□□□□ 0.48
CD74P04233 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD74P04233 C17orf82-201ENST00000623772 1530 ntBASIC18.08■□□□□ 0.48
CD74P04233 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD74P04233 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD74P04233 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.07■□□□□ 0.48
CD74P04233 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.07■□□□□ 0.48
CD74P04233 DUX4L18-201ENST00000553347 1267 ntBASIC18.07■□□□□ 0.48
CD74P04233 PVT1_1.1-201ENST00000615125 194 ntBASIC18.07■□□□□ 0.48
CD74P04233 AC074183.2-201ENST00000623112 922 ntBASIC18.07■□□□□ 0.48
CD74P04233 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.07■□□□□ 0.48
CD74P04233 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.07■□□□□ 0.48
CD74P04233 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD74P04233 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CD74P04233 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CD74P04233 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD74P04233 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 RARRES2P2-201ENST00000394842 485 ntBASIC18.06■□□□□ 0.48
CD74P04233 MIR6722-201ENST00000617286 78 ntBASIC18.06■□□□□ 0.48
CD74P04233 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.06■□□□□ 0.48
CD74P04233 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.06■□□□□ 0.48
CD74P04233 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD74P04233 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.06■□□□□ 0.48
CD74P04233 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD74P04233 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.05■□□□□ 0.48
CD74P04233 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.05■□□□□ 0.48
CD74P04233 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms