Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TGFAP01135 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TGFAP01135 SLC29A4P1-201ENST00000398760 971 ntBASIC17.75■□□□□ 0.43
TGFAP01135 TSPY6P-201ENST00000448518 926 ntBASIC17.75■□□□□ 0.43
TGFAP01135 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.75■□□□□ 0.43
TGFAP01135 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TGFAP01135 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.75■□□□□ 0.43
TGFAP01135 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TGFAP01135 AL050303.2-201ENST00000619798 666 ntBASIC17.75■□□□□ 0.43
TGFAP01135 MYCNOS-205ENST00000641950 531 ntBASIC17.75■□□□□ 0.43
TGFAP01135 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TGFAP01135 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TGFAP01135 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TGFAP01135 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TGFAP01135 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TGFAP01135 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.74■□□□□ 0.43
TGFAP01135 AC142086.2-201ENST00000569753 217 ntBASIC17.74■□□□□ 0.43
TGFAP01135 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TGFAP01135 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.74■□□□□ 0.43
TGFAP01135 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TGFAP01135 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.73■□□□□ 0.43
TGFAP01135 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.73■□□□□ 0.43
TGFAP01135 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.73■□□□□ 0.43
TGFAP01135 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.73■□□□□ 0.43
TGFAP01135 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.73■□□□□ 0.43
TGFAP01135 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
TGFAP01135 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.73■□□□□ 0.43
TGFAP01135 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.73■□□□□ 0.43
TGFAP01135 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.73■□□□□ 0.43
TGFAP01135 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.73■□□□□ 0.43
TGFAP01135 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TGFAP01135 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TGFAP01135 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TGFAP01135 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TGFAP01135 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.72■□□□□ 0.43
TGFAP01135 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.72■□□□□ 0.43
TGFAP01135 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.72■□□□□ 0.43
TGFAP01135 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TGFAP01135 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.71■□□□□ 0.43
TGFAP01135 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.71■□□□□ 0.43
TGFAP01135 AC079089.2-201ENST00000531211 1277 ntBASIC17.71■□□□□ 0.43
TGFAP01135 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.71■□□□□ 0.43
TGFAP01135 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.71■□□□□ 0.43
TGFAP01135 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TGFAP01135 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TGFAP01135 DUSP8P5-201ENST00000422884 1815 ntBASIC17.7■□□□□ 0.42
TGFAP01135 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TGFAP01135 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.7■□□□□ 0.42
TGFAP01135 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.7■□□□□ 0.42
TGFAP01135 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.7■□□□□ 0.42
TGFAP01135 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.7■□□□□ 0.42
TGFAP01135 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.7■□□□□ 0.42
TGFAP01135 TSPY20P-201ENST00000450910 630 ntBASIC17.7■□□□□ 0.42
TGFAP01135 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TGFAP01135 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.7■□□□□ 0.42
TGFAP01135 KRT18P6-201ENST00000555540 1265 ntBASIC17.7■□□□□ 0.42
TGFAP01135 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.7■□□□□ 0.42
TGFAP01135 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.7■□□□□ 0.42
TGFAP01135 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TGFAP01135 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms