Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNKO75909 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNKO75909 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCNKO75909 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCNKO75909 ALDH1A3-203ENST00000557963 1670 ntBASIC18.64■□□□□ 0.57
CCNKO75909 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNKO75909 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNKO75909 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNKO75909 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNKO75909 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNKO75909 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNKO75909 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNKO75909 AC126177.7-201ENST00000547904 679 ntBASIC18.63■□□□□ 0.57
CCNKO75909 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNKO75909 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNKO75909 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNKO75909 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNKO75909 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCNKO75909 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNKO75909 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNKO75909 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNKO75909 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNKO75909 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNKO75909 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCNKO75909 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNKO75909 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCNKO75909 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNKO75909 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCNKO75909 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNKO75909 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCNKO75909 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNKO75909 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCNKO75909 PCDHAC2-203ENST00000615316 3011 ntBASIC18.61■□□□□ 0.57
CCNKO75909 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCNKO75909 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.6■□□□□ 0.57
CCNKO75909 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.6■□□□□ 0.57
CCNKO75909 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCNKO75909 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCNKO75909 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCNKO75909 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.6■□□□□ 0.57
CCNKO75909 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CCNKO75909 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.6■□□□□ 0.57
CCNKO75909 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCNKO75909 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCNKO75909 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCNKO75909 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCNKO75909 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.59■□□□□ 0.57
CCNKO75909 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.59■□□□□ 0.57
CCNKO75909 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 LETM1P2-201ENST00000597330 2178 ntBASIC18.59■□□□□ 0.57
CCNKO75909 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCNKO75909 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCNKO75909 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.58■□□□□ 0.57
CCNKO75909 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms