Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKNO60260 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKNO60260 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRKNO60260 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKNO60260 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.06■□□□□ 0.8
PRKNO60260 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRKNO60260 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.06■□□□□ 0.8
PRKNO60260 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.06■□□□□ 0.8
PRKNO60260 CCDC92B-201ENST00000575506 885 ntBASIC20.06■□□□□ 0.8
PRKNO60260 TPRG1LP1-201ENST00000598702 760 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
PRKNO60260 BX005040.4-201ENST00000637145 1518 ntBASIC20.06■□□□□ 0.8
PRKNO60260 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKNO60260 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRKNO60260 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.05■□□□□ 0.8
PRKNO60260 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.05■□□□□ 0.8
PRKNO60260 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.05■□□□□ 0.8
PRKNO60260 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.05■□□□□ 0.8
PRKNO60260 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKNO60260 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.04■□□□□ 0.8
PRKNO60260 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 ESRRAP2-201ENST00000418437 1549 ntBASIC20.04■□□□□ 0.8
PRKNO60260 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRKNO60260 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.04■□□□□ 0.8
PRKNO60260 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.04■□□□□ 0.8
PRKNO60260 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRKNO60260 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKNO60260 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRKNO60260 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.04■□□□□ 0.8
PRKNO60260 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
PRKNO60260 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRKNO60260 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PRKNO60260 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PRKNO60260 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 AL162430.1-201ENST00000480705 870 ntBASIC20.03■□□□□ 0.8
PRKNO60260 TERF1P2-201ENST00000583350 1212 ntBASIC20.03■□□□□ 0.8
PRKNO60260 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRKNO60260 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 LINC02228-203ENST00000641970 1355 ntBASIC20.03■□□□□ 0.8
PRKNO60260 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
PRKNO60260 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 AC127496.7-201ENST00000625110 1798 ntBASIC20.03■□□□□ 0.8
PRKNO60260 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.03■□□□□ 0.8
PRKNO60260 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRKNO60260 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PRKNO60260 AC034268.1-201ENST00000441047 882 ntBASIC20.02■□□□□ 0.8
PRKNO60260 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.02■□□□□ 0.8
PRKNO60260 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRKNO60260 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRKNO60260 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRKNO60260 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRKNO60260 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.01■□□□□ 0.79
PRKNO60260 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRKNO60260 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRKNO60260 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRKNO60260 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRKNO60260 KRT18P14-201ENST00000534205 1250 ntBASIC20.01■□□□□ 0.79
PRKNO60260 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.01■□□□□ 0.79
PRKNO60260 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRKNO60260 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRKNO60260 OR7E47P-201ENST00000546390 1422 ntBASIC20.01■□□□□ 0.79
PRKNO60260 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.01■□□□□ 0.79
PRKNO60260 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.01■□□□□ 0.79
PRKNO60260 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRKNO60260 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRKNO60260 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms