Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.7■□□□□ 0.58
XRCC2O43543 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
XRCC2O43543 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XRCC2O43543 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
XRCC2O43543 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
XRCC2O43543 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
XRCC2O43543 BX842568.3-201ENST00000418104 571 ntBASIC18.69■□□□□ 0.58
XRCC2O43543 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.69■□□□□ 0.58
XRCC2O43543 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.69■□□□□ 0.58
XRCC2O43543 AL136162.1-201ENST00000607711 1078 ntBASIC18.69■□□□□ 0.58
XRCC2O43543 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XRCC2O43543 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
XRCC2O43543 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XRCC2O43543 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.69■□□□□ 0.58
XRCC2O43543 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
XRCC2O43543 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
XRCC2O43543 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
XRCC2O43543 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.68■□□□□ 0.58
XRCC2O43543 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 MIR4767-201ENST00000582827 78 ntBASIC18.68■□□□□ 0.58
XRCC2O43543 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
XRCC2O43543 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 AC135279.3-201ENST00000610945 1311 ntBASIC18.68■□□□□ 0.58
XRCC2O43543 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XRCC2O43543 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
XRCC2O43543 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.67■□□□□ 0.58
XRCC2O43543 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.67■□□□□ 0.58
XRCC2O43543 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.67■□□□□ 0.58
XRCC2O43543 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.67■□□□□ 0.58
XRCC2O43543 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XRCC2O43543 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.67■□□□□ 0.58
XRCC2O43543 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
XRCC2O43543 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
XRCC2O43543 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 AC024257.2-201ENST00000549699 147 ntBASIC18.66■□□□□ 0.58
XRCC2O43543 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.66■□□□□ 0.58
XRCC2O43543 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.66■□□□□ 0.58
XRCC2O43543 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XRCC2O43543 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.65■□□□□ 0.58
XRCC2O43543 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.65■□□□□ 0.58
XRCC2O43543 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.65■□□□□ 0.58
XRCC2O43543 FAM99A-202ENST00000538190 1989 ntBASIC18.65■□□□□ 0.58
XRCC2O43543 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
XRCC2O43543 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
XRCC2O43543 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XRCC2O43543 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
XRCC2O43543 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
XRCC2O43543 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.64■□□□□ 0.57
XRCC2O43543 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.64■□□□□ 0.57
XRCC2O43543 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.64■□□□□ 0.57
XRCC2O43543 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.64■□□□□ 0.57
XRCC2O43543 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
XRCC2O43543 AL034346.1-201ENST00000568244 1277 ntBASIC18.64■□□□□ 0.57
XRCC2O43543 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms