Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 ESRRAP2-201ENST00000418437 1549 ntBASIC19.46■□□□□ 0.71
SMAD9O15198 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.46■□□□□ 0.71
SMAD9O15198 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.46■□□□□ 0.71
SMAD9O15198 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.46■□□□□ 0.71
SMAD9O15198 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMAD9O15198 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD9O15198 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.45■□□□□ 0.7
SMAD9O15198 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.45■□□□□ 0.7
SMAD9O15198 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.45■□□□□ 0.7
SMAD9O15198 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.45■□□□□ 0.7
SMAD9O15198 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.45■□□□□ 0.7
SMAD9O15198 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.45■□□□□ 0.7
SMAD9O15198 OXCT2P1-201ENST00000447263 1535 ntBASIC19.45■□□□□ 0.7
SMAD9O15198 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMAD9O15198 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD9O15198 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMAD9O15198 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMAD9O15198 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.44■□□□□ 0.7
SMAD9O15198 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.44■□□□□ 0.7
SMAD9O15198 AC233723.2-201ENST00000623798 2106 ntBASIC19.44■□□□□ 0.7
SMAD9O15198 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD9O15198 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 AC137767.1-201ENST00000602918 1920 ntBASIC19.43■□□□□ 0.7
SMAD9O15198 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMAD9O15198 IRS3P-201ENST00000223076 1006 ntBASIC19.43■□□□□ 0.7
SMAD9O15198 MIR572-201ENST00000384983 95 ntBASIC19.43■□□□□ 0.7
SMAD9O15198 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.43■□□□□ 0.7
SMAD9O15198 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMAD9O15198 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD9O15198 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD9O15198 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMAD9O15198 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD9O15198 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SMAD9O15198 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD9O15198 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD9O15198 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.41■□□□□ 0.7
SMAD9O15198 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD9O15198 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.41■□□□□ 0.7
SMAD9O15198 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMAD9O15198 AC079089.2-201ENST00000531211 1277 ntBASIC19.41■□□□□ 0.7
SMAD9O15198 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.41■□□□□ 0.7
SMAD9O15198 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
SMAD9O15198 AC127496.7-201ENST00000625110 1798 ntBASIC19.41■□□□□ 0.7
SMAD9O15198 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms