Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 AC026310.3-201ENST00000625186 2373 ntBASIC17.35■□□□□ 0.37
SRRM4A7MD48 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.35■□□□□ 0.37
SRRM4A7MD48 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SRRM4A7MD48 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SRRM4A7MD48 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRRM4A7MD48 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRRM4A7MD48 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.34■□□□□ 0.37
SRRM4A7MD48 SLC47A1P1-202ENST00000449666 945 ntBASIC17.34■□□□□ 0.37
SRRM4A7MD48 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.34■□□□□ 0.37
SRRM4A7MD48 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM4A7MD48 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM4A7MD48 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM4A7MD48 OXCT2P1-201ENST00000447263 1535 ntBASIC17.33■□□□□ 0.37
SRRM4A7MD48 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM4A7MD48 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.33■□□□□ 0.36
SRRM4A7MD48 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM4A7MD48 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.33■□□□□ 0.36
SRRM4A7MD48 AC131212.1-201ENST00000613771 668 ntBASIC17.33■□□□□ 0.36
SRRM4A7MD48 AC087239.1-201ENST00000622671 572 ntBASIC17.33■□□□□ 0.36
SRRM4A7MD48 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SRRM4A7MD48 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM4A7MD48 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM4A7MD48 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.33■□□□□ 0.36
SRRM4A7MD48 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRRM4A7MD48 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM4A7MD48 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM4A7MD48 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM4A7MD48 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SRRM4A7MD48 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.31■□□□□ 0.36
SRRM4A7MD48 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM4A7MD48 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM4A7MD48 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 UNC93B3-201ENST00000308076 687 ntBASIC17.3■□□□□ 0.36
SRRM4A7MD48 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 AP005435.1-201ENST00000529293 1178 ntBASIC17.3■□□□□ 0.36
SRRM4A7MD48 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 AC244015.2-201ENST00000616358 1861 ntBASIC17.3■□□□□ 0.36
SRRM4A7MD48 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM4A7MD48 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM4A7MD48 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.29■□□□□ 0.36
SRRM4A7MD48 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM4A7MD48 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms