Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CCDC92B-201ENST00000575506 885 ntBASIC22.55■■□□□ 1.2
YJEFN3A6XGL0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.55■■□□□ 1.2
YJEFN3A6XGL0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.55■■□□□ 1.2
YJEFN3A6XGL0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
YJEFN3A6XGL0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 TERF1P2-201ENST00000583350 1212 ntBASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.54■■□□□ 1.2
YJEFN3A6XGL0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
YJEFN3A6XGL0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L2-201ENST00000561772 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L6-201ENST00000626483 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L1-201ENST00000627662 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L8-201ENST00000629013 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L3-201ENST00000630187 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L7-201ENST00000630678 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 DUX4L5-201ENST00000630834 1275 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 AC005224.4-201ENST00000583262 1652 ntBASIC22.52■■□□□ 1.2
YJEFN3A6XGL0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
YJEFN3A6XGL0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
YJEFN3A6XGL0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.52■■□□□ 1.19
YJEFN3A6XGL0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 AC009237.3-201ENST00000393279 1427 ntBASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
YJEFN3A6XGL0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 KRT18P14-201ENST00000534205 1250 ntBASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 AC092053.2-201ENST00000640557 1818 ntBASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
YJEFN3A6XGL0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 AL034346.1-201ENST00000568244 1277 ntBASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 MIR5787-201ENST00000611784 55 ntBASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 AL117328.2-201ENST00000624617 1940 ntBASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
YJEFN3A6XGL0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms